Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00011705 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 2637097 ~ 2638618 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00011705 | True | 797 | mRNA | 0.62 | 5 | 2637097 | 2638618 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011706 | NA | coding | upstream | 6037 | 2619628 ~ 2631060 (+) |
| AMCG00011701 | NA | coding | upstream | 99636 | 2531348 ~ 2537461 (+) |
| AMCG00011704 | NA | coding | upstream | 110050 | 2519272 ~ 2527047 (+) |
| AMCG00011694 | NA | coding | upstream | 190137 | 2433022 ~ 2446960 (+) |
| AMCG00011696 | ybx2,LOC104945427 | coding | upstream | 233079 | 2398246 ~ 2404018 (+) |
| AMCG00011714 | NA | coding | downstream | 95571 | 2734189 ~ 2744573 (+) |
| AMCG00011712 | LOC105031478 | coding | downstream | 139242 | 2777860 ~ 2782298 (+) |
| AMCG00011717 | NA | coding | downstream | 166473 | 2805091 ~ 2811663 (+) |
| AMCG00011723 | NA | coding | downstream | 291644 | 2930262 ~ 2938174 (+) |
| AMCG00011724 | NA | coding | downstream | 325612 | 2964230 ~ 2974831 (+) |
| G131983 | NA | non-coding | upstream | 2147 | 2634331 ~ 2634950 (+) |
| G131942 | NA | non-coding | upstream | 172491 | 2463991 ~ 2464606 (+) |
| G131941 | NA | non-coding | upstream | 174747 | 2462145 ~ 2462350 (+) |
| G131908 | NA | non-coding | upstream | 309365 | 2327120 ~ 2327732 (+) |
| G131893 | NA | non-coding | upstream | 336524 | 2300343 ~ 2300573 (+) |
| G131988 | NA | non-coding | downstream | 6930 | 2645548 ~ 2647440 (+) |
| G131992 | NA | non-coding | downstream | 22639 | 2661257 ~ 2661551 (+) |
| G132215 | NA | non-coding | downstream | 350128 | 2988746 ~ 2989007 (+) |
| G132268 | NA | non-coding | downstream | 465542 | 3104160 ~ 3115307 (+) |
| G132270 | NA | non-coding | downstream | 531120 | 3169738 ~ 3250107 (+) |
| G131981 | neurl4,LOC102791343 | other | upstream | 21036 | 2615453 ~ 2616061 (+) |
| AMCG00011702 | NA | other | upstream | 86060 | 2541795 ~ 2551037 (+) |
| AMCG00011695 | NA | other | upstream | 175372 | 2451363 ~ 2461725 (+) |
| G131898 | bola2,LOC105020731,LOC105907194,LOC108436240,LOC104959592 | other | upstream | 317064 | 2318010 ~ 2320033 (+) |
| AMCG00011676 | NA | other | upstream | 370293 | 2252818 ~ 2266804 (+) |
| AMCG00011713 | LOC107377402,LOC101163851,LOC108249525,LOC106525311 | other | downstream | 52921 | 2691539 ~ 2700390 (+) |
| AMCG00011718 | naa38,lsmd1 | other | downstream | 214199 | 2852817 ~ 2858284 (+) |
| G132058 | NA | other | downstream | 238656 | 2877274 ~ 2880260 (+) |
| G132072 | NA | other | downstream | 299752 | 2938370 ~ 2941171 (+) |
| G132221 | NA | other | downstream | 362814 | 3001432 ~ 3004662 (+) |
