Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013870 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 45855452 ~ 45876895 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0031231 | intrinsic component of peroxisomal membrane | cellular_component |
| GO:0005777 | peroxisome | cellular_component |
| GO:0005778 | peroxisomal membrane | cellular_component |
| GO:0005779 | integral component of peroxisomal membrane | cellular_component |
| GO:0044438 | obsolete microbody part | cellular_component |
| GO:0044439 | obsolete peroxisomal part | cellular_component |
| GO:0031903 | microbody membrane | cellular_component |
| GO:0042579 | microbody | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013870 | True | 1467 | mRNA | 0.50 | 14 | 45855452 | 45876895 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013871 | LOC103358259 | coding | upstream | 9316 | 45833821 ~ 45846136 (+) |
| AMCG00013869 | NA | coding | upstream | 52641 | 45800918 ~ 45802811 (+) |
| AMCG00013873 | NA | coding | upstream | 56511 | 45793535 ~ 45798941 (+) |
| AMCG00013863 | NA | coding | upstream | 114910 | 45720220 ~ 45740542 (+) |
| AMCG00013862 | NA | coding | upstream | 160424 | 45682080 ~ 45695028 (+) |
| AMCG00013868 | NA | coding | downstream | 1203 | 45878098 ~ 45885313 (+) |
| AMCG00013878 | NA | coding | downstream | 12400 | 45889295 ~ 45893895 (+) |
| AMCG00013881 | NA | coding | downstream | 18252 | 45895147 ~ 45901581 (+) |
| AMCG00013880 | NA | coding | downstream | 99333 | 45976228 ~ 45978644 (+) |
| AMCG00013884 | NA | coding | downstream | 116318 | 45993213 ~ 46005467 (+) |
| G47322 | NA | non-coding | upstream | 683 | 45851095 ~ 45854769 (+) |
| G47336 | NA | non-coding | upstream | 28800 | 45826312 ~ 45826652 (+) |
| G47320 | NA | non-coding | upstream | 55029 | 45782026 ~ 45800423 (+) |
| G47264 | irf6 | non-coding | upstream | 213815 | 45639864 ~ 45641637 (+) |
| G47262 | NA | non-coding | upstream | 230881 | 45624372 ~ 45624571 (+) |
| G47383 | NA | non-coding | downstream | 24972 | 45901867 ~ 45903185 (+) |
| G47387 | NA | non-coding | downstream | 29207 | 45906102 ~ 45906399 (+) |
| G47390 | NA | non-coding | downstream | 44245 | 45921140 ~ 45921898 (+) |
| G47546 | NA | non-coding | downstream | 419738 | 46296633 ~ 46302869 (+) |
| G47580 | NA | non-coding | downstream | 542237 | 46419132 ~ 46470471 (+) |
| AMCG00013872 | NA | other | upstream | 32224 | 45816372 ~ 45823228 (+) |
| G47206 | NA | other | upstream | 494570 | 45326658 ~ 45360882 (+) |
| AMCG00013838 | si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 | other | upstream | 759783 | 45034772 ~ 45095669 (+) |
| G46945 | NA | other | upstream | 2414754 | 43438492 ~ 43440698 (+) |
| G46862 | NA | other | upstream | 2765809 | 43087289 ~ 43089643 (+) |
| G47398 | NA | other | downstream | 57764 | 45934659 ~ 45941906 (+) |
| AMCG00013879 | dennd2d | other | downstream | 66676 | 45943571 ~ 45959194 (+) |
| AMCG00013919 | LOC102792503,LOC106583503,LOC106565096 | other | downstream | 1160200 | 47037095 ~ 47073708 (+) |
| AMCG00013927 | LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 | other | downstream | 1343024 | 47219919 ~ 47227969 (+) |
| AMCG00013943 | NA | other | downstream | 1875319 | 47752214 ~ 47819723 (+) |
