AMCG00013873


Basic Information

Item Value
gene id AMCG00013873
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45793535 ~ 45798941 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013873
ATGGCTCCGGACACGGCACAGCATGAGCTGCCCTCTGCCGCCCCGACTCCCTCCCTCGCTCGCATATGGGCTCTGCTGGGCTTTCACAACGCATTACCCCGGCCCTCGTGTCTCCACGCCCCGGCCTGCACCGCAGCTGGCCCGGCTCGGCAGCAGGCGGAGGCGCAAATGCGATTCCCCACGCATGAGCGGGCTCTTCCGCGCCTAACGAGCCTCGCTAGCCTCAGCCAAACCCCTCCCGATGTGGCTTCATCTCGGACACGGTGCCGACAAGCAGCATGGCTTTCAAACACTGGCGGAACAGCGAGGGGCTGCGGGAGTCACCGAGGGTCAGAAAGGCTCCCGAGGGCCTCACTCGACTGCCGCGGGGTGGCAGCCAATGAAATGGCAGGTTGgtaccagcaccagcaccagcaccagcactgGCTGAGGGTGGCCATGGGCTGTCGGCTGTCCGGGTTGTGGCTGGACGACGGTCTGGAGGTGAATGGGCGGGACCTGTCCCACGTCAGCCAGCAGGAGGTCCTGCAGATCCTGGGGGGCTACGAGGAGCCCATCACCCTGCAGATCGACAGCAGGAAGTCCCGCGCTCAGAGGAGGCAGGTGTCCGACTGCGGCACCCAGACCGAGCGGCCCTGGGACACGCTGAGGGGCCTGGGGGTCACAGTGGGGTCATCGCCCCGGCTCAGCTCCTACAGTGACAGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013873 True 708 mRNA 0.67 3 45793535 45798941

Neighbor

gene id symbol gene type direction distance location
AMCG00013863 NA coding upstream 52993 45720220 ~ 45740542 (+)
AMCG00013862 NA coding upstream 98507 45682080 ~ 45695028 (+)
AMCG00013852 guca1b,LOC107562461,LOC107657012 coding upstream 137163 45653353 ~ 45656372 (+)
AMCG00013855 NA coding upstream 156966 45635112 ~ 45636569 (+)
AMCG00013853 NA coding upstream 160059 45628387 ~ 45633476 (+)
AMCG00013869 NA coding downstream 1977 45800918 ~ 45802811 (+)
AMCG00013871 LOC103358259 coding downstream 34880 45833821 ~ 45846136 (+)
AMCG00013870 NA coding downstream 56511 45855452 ~ 45876895 (+)
AMCG00013868 NA coding downstream 79157 45878098 ~ 45885313 (+)
AMCG00013878 NA coding downstream 90354 45889295 ~ 45893895 (+)
G47264 irf6 non-coding upstream 151898 45639864 ~ 45641637 (+)
G47262 NA non-coding upstream 168964 45624372 ~ 45624571 (+)
G47258 NA non-coding upstream 170729 45622587 ~ 45622806 (+)
G47255 atp5f1,LOC107679218,LOC107731279,LOC107711984 non-coding upstream 173303 45616133 ~ 45620232 (+)
G47232 NA non-coding upstream 219222 45569409 ~ 45574313 (+)
G47336 NA non-coding downstream 27371 45826312 ~ 45826652 (+)
G47322 NA non-coding downstream 52154 45851095 ~ 45854769 (+)
G47383 NA non-coding downstream 102926 45901867 ~ 45903185 (+)
G47387 NA non-coding downstream 107161 45906102 ~ 45906399 (+)
G47390 NA non-coding downstream 122199 45921140 ~ 45921898 (+)
G47206 NA other upstream 432653 45326658 ~ 45360882 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other upstream 697866 45034772 ~ 45095669 (+)
G46945 NA other upstream 2352837 43438492 ~ 43440698 (+)
G46862 NA other upstream 2703892 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 2749099 43039984 ~ 43044436 (+)
AMCG00013872 NA other downstream 17431 45816372 ~ 45823228 (+)
G47398 NA other downstream 135718 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 144630 45943571 ~ 45959194 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other downstream 1238154 47037095 ~ 47073708 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other downstream 1420978 47219919 ~ 47227969 (+)

Expression


Co-expression Network