AMCG00015693


Basic Information

Item Value
gene id AMCG00015693
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16651198 ~ 16677591 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015693
GGTCTCTCTCATGACGTACGACACCCCAGCCTCGGGCGAATGTGGCGGAAGAGCCCGGATGTTGTTGCCCATTCTGTTCGCTCTTCTGCGTTCTATCCTGGAAACCGTCCTCTTCCGGGTCTGGACTGTGGGAGCTGAGCGGCGCCGACGACAGCACAGTCCTGCATGCACATCTGCGAGATCCACACAGCAGCACCATACCGTTGGCGACATATCAAAGCCTCGGAAAACACCTGCAGGAGACCATAATGTCTGACGAATCCCCCAAAAATACTGCTGCAGAAATCTCGGTGACCAGTAACGGTGATGCTGATGAATCAAATGAAGATGTATTTCAAAGGGACGTGATGCACAGTGGGTCTGGCGGTTTAAGTTTGGCTGAAACCCACATCATTTCCACTAACTGTGGGACTGTGACAGAGGGCATTAATGAAGCAGTACCATGTgaagGATCTACAAGTCAGACCACATCACCTGTTGTATCTCCCAGCAGTTCTGTGGCTAGCAGGCTGGCCAGGATAGACAACGATACTCCTAGTGACAAAGGCATGATGAACGTGGAGGCTAAGAGTGGACCAGTAGTTGTCTCTGATGATCTCAAAAATCCTGCCATTGAGAAGTTGGAGCTGGTGAGAAAGTGGAGCATCAACACATACAAACTGGGTCGTGGTTCTAGAACTGTAGACTTGGAGCTGGAGGCTCAGATAGAAATTTTGCGAGACAACAAGAGGAAGTACGAGCACATCATAAAGCTGTCGCAGACACTGGCAACACAGCTCTTTCAGATGGTGCAGACACAGAGGCAATTGGGAGATGCTTTTGCAGACCTAAGTTTAAAATCTCCAGAGCTTCACGAGGAGTTTGGTTTCAATGCTGATACCCAAAAACTCTTGTCTAAAAATGGAGAGACACTTCTGGGAGCCATTAACTTCTTCATTTCAAGTGTGAACACCCTGATAGAGAAAACAATTGAAGATACCATGGTCAACattaaacaatatgaaaatgCCAGGGTTGAGTATGATGCGTACCGTACAGACCTGGAGGAGCTGAACTTGGGCCCTCGAGATGCTACTACTGTTCCAAAGATAGAGGTTTGTCAGCAGCAGTTCCAGATCCACAGggagaaatatgaaaaaatgcgCAATGATGTTGCAATCAAACTAAAGTTTCTTGAGGAAAACAAGgtTAAGGTATTACACAACCAGCTTGTCCTGTTCCATAATGCCATGGCAGCCTACTATGCAGGGAACCAACAGCAACTTGAAAAGACGCTTAAACAGTTCCACATTAAGTTGAAAATTCCTGGAGGAGACTCTCCATCCTGGTTAGAAGAGCAATAATCACATTGGAGTTATATGTAACACAGCCAGAAGCATCTATAACTAGTGCAGAAGTGAGAAGCACAGTGGagcattgaaattaattttaaaaaacaaataatagattTTCTCCCCTTTTTTATAGCATATCAAATCTTCATGCAAAAtctactgaaaaataataatgtatagatTAATAAAATCCCCAATTTTTACTTCATCTCCAGAATCAAAGTATTATACcatgttggtttatttttatttattccccccttattatatttttatttaaaactgtattcaagaatgtatgtttttgcaGCTAAAACTATTATTCTAAGAATTACATTCATGATTCTTTGATCTAAGGAAATTTCATATTTTGCCTTAAGATAAATCCATATCAACATTAGTTAACACTATTTCCTTATTGGTGTTAACTGTGTTCAGTTTGATTGCTATATTGTGTTTGGGAGAACagcttttaattattaagaATTAAGAATATCTCTAATGAAGTCTCGTTCATGTTTCGAGTAGTTTATGCAAGTTGTCTGTATGAGAGTCAGTAGGCAACTCACAccactccatctctctctcttcacactGGAGTGAAGGTTAAATTGGGGGGGTATCTCTCTGGCGTAATGTCACTTTGACTCCTCACACAGACACCTATAAACCACATAATGAGACCTGTTCAAACCTCAGATATGTTTTCTTAATCATTAAGGCTGGAATCgtataaagggaaaaaaa

Function

GO:

id name namespace
GO:0019904 protein domain specific binding molecular_function

KEGG:

id description
K20314 ARFIP; arfaptin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015693 True 2081 mRNA 0.42 9 16651198 16677591

Neighbor

gene id symbol gene type direction distance location
AMCG00015697 NA coding downstream 278 16615613 ~ 16650920 (-)
AMCG00015696 NA coding downstream 60199 16581695 ~ 16590999 (-)
AMCG00015695 NA coding downstream 71988 16575258 ~ 16579210 (-)
AMCG00015690 NA coding downstream 104312 16536547 ~ 16546886 (-)
AMCG00015683 NA coding downstream 187258 16460722 ~ 16463940 (-)
AMCG00015702 NA coding upstream 328531 17006122 ~ 17018382 (-)
AMCG00015704 rps3a,rs3a coding upstream 450316 17127907 ~ 17131775 (-)
AMCG00015712 mab21l2 coding upstream 654061 17331652 ~ 17332731 (-)
AMCG00015711 NA coding upstream 659742 17337333 ~ 17488602 (-)
AMCG00015713 NA coding upstream 845688 17523279 ~ 17547496 (-)
G99777 NA non-coding downstream 50820 16599093 ~ 16600378 (-)
G99758 NA non-coding downstream 78922 16560585 ~ 16572276 (-)
G99710 NA non-coding downstream 123271 16503791 ~ 16527927 (-)
G99735 NA non-coding downstream 152667 16497485 ~ 16498531 (-)
G99724 NA non-coding downstream 222572 16424750 ~ 16428626 (-)
G99804 NA non-coding upstream 36856 16714447 ~ 16714835 (-)
G99816 NA non-coding upstream 193051 16870642 ~ 16871119 (-)
G99830 NA non-coding upstream 324403 17001994 ~ 17004413 (-)
G99860 NA non-coding upstream 457336 17134927 ~ 17135183 (-)
G99923 NA non-coding upstream 970460 17648051 ~ 17704580 (-)
AMCG00015694 NA other downstream 39754 16592228 ~ 16611444 (-)
AMCG00015691 NA other downstream 115730 16524114 ~ 16535468 (-)
AMCG00015681 NA other downstream 178021 16467299 ~ 16473177 (-)
G99646 NA other downstream 429043 16221765 ~ 16222155 (-)
G99605 NA other downstream 548742 16017583 ~ 16102456 (-)
G99939 NA other upstream 1159989 17837580 ~ 17837942 (-)
AMCG00015723 lsm6,LOC106610200 other upstream 1950014 18627605 ~ 18630665 (-)
AMCG00015752 NA other upstream 3297365 19974956 ~ 19981557 (-)
AMCG00015761 herc3 other upstream 3549776 20227367 ~ 20279644 (-)
AMCG00015800 NA other upstream 6003103 22680694 ~ 22702249 (-)

Expression


Co-expression Network