G97562


Basic Information

Item Value
gene id G97562
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8612495 ~ 8634660 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121638
ttttttttttttaaGtagacactttattttttatttttcattattataattcaagtgcttttttattttccaggtcAAGAATTGGTGGCATTAGATTTAGACTTTTTCCTGCAATTCCCGACTGtaagaattacaaaataataataataattgacagCGATGAGAATCTGGGAATGAATGTTTGGAGATTTGGAATTGTCTCTTCTACACCCCCCCTACCTCCTACCACTCCCAGTGTGGGTCAGGGACAGGaggcggggggtgggggacagACGCTGCCCCATGTCCGAACCTCTCATTGCAGTCAGAGCTTCAGAGGTCGGACCTGCGCTCGATTGTCAGCAACTCCACTTCGAAAATGAGCGTCGCACCACCTGG
>TU121639
CTCGTCCCATTTCACAAACTTGCCCCCTTTCTTCAGCGCTTCGTGGACCGAGACGGGTTTGAGCTGCAGAGCATGCACCCCGGGACGAGCCCCGGCCATCCCGGCACTCCCGGCGGGCTGGGAATCCCGATCCGCGCCGCCTCACCGGCTCCCTTCCCCCTGTGGCGCGGTTCCGATGGCCGGTCCGGTGGGGTCGGGTTggtcagtgagtgagtgagtgtgtggggggggggggtccccACTTGGACACACAGCCAGTCTCTCTGATTGGTGGGGTTTAATTAGACGGGTGTTTACAGATCAAAAGTTCCAGTTGTGACTCCCCGATGAAACCGAATTCCTCGttgtccctcctcctcctcctcctccttccctgAGAGTTGCGCCTCTTCTTCTCGTTTtaacgtctctctctctctctctctctccggtgCCAGGATCTTTAGCTTGCTTCTCTCGTGTTTCtcggagaaagagagaggaggaggaggaagagggagggagagagagagcgaaccACTcgactttttcttctttctttttcttttttccctccctctttcctcgTCTTCTGTGTAGAAGTGTAATTATCGGTGTCTATCGGACTTACTCAACAGGCTGCAAGAAGGCGTGTTTTATCAGCGCATTGGAGAGCAGTTCTTCTTAAAGGGACAGTGTGTGTTCACTGTCCTACTAcacccctctccctttctcctccttctcctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcaccctcctcAGGCTATTGCAACGGCACCACTCCCAGTCAAGGGCTCGTAAAAATTCTTCGCGATTTCTTTCCCGTTCCTTCCGTTCCCGACATACTATTGGTTATTAATACGATTACAGTTATTATTGATCGATTATTCGATGTCTGCTCTGTACACTCACCCccccacactcactcacactcacacacacacacacagactcacacacacacacacacttatacacacacacacactctcacacacacacacacacacacacacactcacacactcacacacacacacactcacacacacacacacacacactcacacacacacacactcacactcacacacacacacactcacactcacactccacACAAGGCTGAACACACTGGAATGTTCTTGAACCGTTTCCCACGGTATCTCTTGCGTCCCTCTGGCGTGAGTGTGTACGTGAGGCCCTGCGGCAagacactgagcagagccaGATGACCCGGGACAGCACTGCTGCTGGGGTGCTAGTGCTGCCTCGCTTTTGTGCTTGGCGTTGTCCCCCGGGTGGCAAGTTCCCACCATCCATGACACGTCCAGGTAAACTTTCTCATACTGaggtccctccctctctccctgtctttttttgttttagGtagacactttattttttatttttcattattataattcaagtgcttttttattttccaggtcAAGAATTGGTGGCATTAGATTTAGACTTTTTCCTGCAATTCCCGACTGtaagaattacaaaataataataataattgacagCGATGAGAATCTGGGAATGAATGTTTGGAGATTTGGAATTGTCTCTTCTACACCCCCCCTACCTCCTACCACTCCCAGTGTGGGTCAGGGACAGGaggcggggggtgggggacagACGCTGCCCCATGTCCGAACCTCTCATTGCAGTCAGAGCTTCAGAGGTCGGACCTGCGCTCGATTGTCAGCAACTCCACTTCGAAAATGAGCGTCGCACCACCTGG

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0009611 response to wounding biological_process
GO:0007596 blood coagulation biological_process
GO:0007599 hemostasis biological_process
GO:0050817 coagulation biological_process
GO:0042060 wound healing biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU121638 False 378 lncRNA 0.43 2 8612495 8634660
TU121639 True 1788 lncRNA 0.52 2 8612495 8628499

Neighbor

gene id symbol gene type direction distance location
AMCG00015380 NA coding downstream 4187 8601327 ~ 8608308 (-)
AMCG00015375 NA coding downstream 77095 8534379 ~ 8535400 (-)
AMCG00015371 NA coding downstream 83813 8526032 ~ 8528682 (-)
AMCG00015373 NA coding downstream 117635 8486551 ~ 8494860 (-)
AMCG00015367 calm1,LOC102293206,LOC102778633,LOC107396020 coding downstream 131133 8479116 ~ 8481362 (-)
AMCG00015387 LOC108267603,LOC106603153,LOC107583282,LOC107721660 coding upstream 33544 8668204 ~ 8671343 (-)
AMCG00015385 LOC108428058,LOC107568312,LOC107715375,LOC107669368 coding upstream 51107 8685767 ~ 8687647 (-)
AMCG00015386 NA coding upstream 98675 8733335 ~ 8734447 (-)
AMCG00015388 ppp2r5b,LOC107588189,LOC107749805 coding upstream 125205 8759865 ~ 8777414 (-)
AMCG00015384 NA coding upstream 148000 8782660 ~ 8784858 (-)
G97561 NA non-coding downstream 1099 8610947 ~ 8611396 (-)
G97536 NA non-coding downstream 14196 8596735 ~ 8598299 (-)
G97475 NA non-coding downstream 179179 8431923 ~ 8433316 (-)
G97409 gng3,LOC107559409 non-coding downstream 486031 8124268 ~ 8126464 (-)
G97395 NA non-coding downstream 543458 8068780 ~ 8069037 (-)
G97574 NA non-coding upstream 20513 8655173 ~ 8656821 (-)
G97575 NA non-coding upstream 29415 8664075 ~ 8668051 (-)
G97589 NA non-coding upstream 84586 8719246 ~ 8719559 (-)
G97801 NA non-coding upstream 146077 8780737 ~ 8782633 (-)
G97805 NA non-coding upstream 433283 9067943 ~ 9072138 (-)
AMCG00015372 lrfn4,LOC101077706,LOC106517947,LOC102210474,LOC101487083,LOC102311587 other downstream 29809 8579500 ~ 8582686 (-)
AMCG00015374 NA other downstream 66700 8541188 ~ 8545795 (-)
G97455 mark2a,LOC107715377 other downstream 200613 8409987 ~ 8411882 (-)
AMCG00015361 NA other downstream 242464 8361614 ~ 8370031 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other downstream 328866 8223199 ~ 8283629 (-)
AMCG00015393 zgc:77262,LOC107715378,LOC107669316,LOC107568302,LOC108428054,LOC107567914,LOC108278748,LOC107700012 other upstream 155000 8789660 ~ 8794774 (-)
AMCG00015394 NA other upstream 194642 8829302 ~ 8838979 (-)
AMCG00015400 NA other upstream 319853 8954513 ~ 8960144 (-)
AMCG00015409 NA other upstream 403936 9038596 ~ 9040141 (-)
AMCG00015415 NA other upstream 517558 9152218 ~ 9156447 (-)

Expression


Co-expression Network