Gene
RNA
| Item | Value |
|---|---|
| gene id | G100257 |
| gene name | LOC104962440 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 19721668 ~ 19740201 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC104962440 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125251 | True | 246 | lncRNA | 0.50 | 2 | 19721668 | 19740201 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015740 | NA | coding | downstream | 462546 | 19239310 ~ 19259122 (-) |
| AMCG00015739 | NA | coding | downstream | 567356 | 19132809 ~ 19154312 (-) |
| AMCG00015738 | smarca5,LOC107703846 | coding | downstream | 596186 | 19110816 ~ 19125482 (-) |
| AMCG00015735 | LOC106602344 | coding | downstream | 802061 | 18876488 ~ 18919607 (-) |
| AMCG00015733 | NA | coding | downstream | 858860 | 18860261 ~ 18862808 (-) |
| AMCG00015743 | znf330,zn330,LOC107746098 | coding | upstream | 7063 | 19747264 ~ 19760155 (-) |
| AMCG00015749 | NA | coding | upstream | 167438 | 19907639 ~ 19910150 (-) |
| AMCG00015750 | NA | coding | upstream | 187181 | 19927382 ~ 19928527 (-) |
| AMCG00015753 | LOC108275807,LOC108441536 | coding | upstream | 192084 | 19932285 ~ 19945300 (-) |
| AMCG00015751 | NA | coding | upstream | 255968 | 19996169 ~ 20010622 (-) |
| G100233 | NA | non-coding | downstream | 8452 | 19712927 ~ 19713216 (-) |
| G100222 | NA | non-coding | downstream | 20209 | 19671742 ~ 19701459 (-) |
| G100218 | NA | non-coding | downstream | 21839 | 19625060 ~ 19699829 (-) |
| G100185 | NA | non-coding | downstream | 589102 | 19132360 ~ 19132566 (-) |
| G100109 | NA | non-coding | downstream | 914992 | 18799570 ~ 18806676 (-) |
| G100261 | rnf150,LOC107703843,LOC107746087 | non-coding | upstream | 61775 | 19801976 ~ 19802225 (-) |
| G100267 | NA | non-coding | upstream | 99173 | 19839374 ~ 19844744 (-) |
| G100297 | NA | non-coding | upstream | 185601 | 19925802 ~ 19926102 (-) |
| G100381 | NA | non-coding | upstream | 253039 | 19993240 ~ 19995630 (-) |
| G100385 | NA | non-coding | upstream | 355680 | 20095881 ~ 20100083 (-) |
| AMCG00015723 | lsm6,LOC106610200 | other | downstream | 1091003 | 18627605 ~ 18630665 (-) |
| G99939 | NA | other | downstream | 1883726 | 17837580 ~ 17837942 (-) |
| AMCG00015694 | NA | other | downstream | 3110224 | 16592228 ~ 16611444 (-) |
| AMCG00015691 | NA | other | downstream | 3186200 | 16524114 ~ 16535468 (-) |
| AMCG00015681 | NA | other | downstream | 3248491 | 16467299 ~ 16473177 (-) |
| AMCG00015752 | NA | other | upstream | 234755 | 19974956 ~ 19981557 (-) |
| AMCG00015761 | herc3 | other | upstream | 487166 | 20227367 ~ 20279644 (-) |
| AMCG00015800 | NA | other | upstream | 2940493 | 22680694 ~ 22702249 (-) |
| AMCG00015825 | LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 | other | upstream | 4003589 | 23743790 ~ 23746703 (-) |
| G101067 | NA | other | upstream | 5252752 | 24992953 ~ 25000890 (-) |
