G100297


Basic Information

Item Value
gene id G100297
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 19925802 ~ 19926102 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125302
TGAAAGACCAGAGGCCAACAATTTGCCAACAGtaaatttgaaagaaaagaaaggcaacaggctttaaaatatgtgtttgggTGTTTGCCTCCCATGGCAAAGCGAATCAAGATGCTGCGCTGAATGTAGCACTAAGAAGGAGCCTGTGTGGAAGTTCcttgtttgtacattttcttagtATGCACATGTTATAACTATATACAGGTGTGCAGATGCTCTGGAGAGCAGAAAACTCTCATGCATGATTAAATGTCATGGTCAACTTCCTACAATGTCCTTAAAcccaaacacatattttaaa

Function

NR:

description
PREDICTED: dihydropyrimidinase-related protein 2-like, partial

GO:

id name namespace
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125302 True 301 lncRNA 0.39 1 19925802 19926102

Neighbor

gene id symbol gene type direction distance location
AMCG00015749 NA coding downstream 15652 19907639 ~ 19910150 (-)
AMCG00015743 znf330,zn330,LOC107746098 coding downstream 165647 19747264 ~ 19760155 (-)
AMCG00015740 NA coding downstream 666680 19239310 ~ 19259122 (-)
AMCG00015739 NA coding downstream 771490 19132809 ~ 19154312 (-)
AMCG00015738 smarca5,LOC107703846 coding downstream 800320 19110816 ~ 19125482 (-)
AMCG00015750 NA coding upstream 1280 19927382 ~ 19928527 (-)
AMCG00015753 LOC108275807,LOC108441536 coding upstream 6183 19932285 ~ 19945300 (-)
AMCG00015751 NA coding upstream 70067 19996169 ~ 20010622 (-)
AMCG00015755 NA coding upstream 189191 20115293 ~ 20122414 (-)
AMCG00015763 NA coding upstream 387028 20313130 ~ 20340896 (-)
G100267 NA non-coding downstream 81058 19839374 ~ 19844744 (-)
G100261 rnf150,LOC107703843,LOC107746087 non-coding downstream 123577 19801976 ~ 19802225 (-)
G100257 LOC104962440 non-coding downstream 185601 19721668 ~ 19740201 (-)
G100233 NA non-coding downstream 212586 19712927 ~ 19713216 (-)
G100222 NA non-coding downstream 224343 19671742 ~ 19701459 (-)
G100381 NA non-coding upstream 67138 19993240 ~ 19995630 (-)
G100385 NA non-coding upstream 169779 20095881 ~ 20100083 (-)
G100391 LOC100846954 non-coding upstream 227084 20153186 ~ 20153634 (-)
G100416 NA non-coding upstream 380949 20307051 ~ 20309103 (-)
G100468 NA non-coding upstream 850518 20776620 ~ 20776836 (-)
AMCG00015723 lsm6,LOC106610200 other downstream 1295137 18627605 ~ 18630665 (-)
G99939 NA other downstream 2087860 17837580 ~ 17837942 (-)
AMCG00015694 NA other downstream 3314358 16592228 ~ 16611444 (-)
AMCG00015691 NA other downstream 3390334 16524114 ~ 16535468 (-)
AMCG00015681 NA other downstream 3452625 16467299 ~ 16473177 (-)
AMCG00015752 NA other upstream 48854 19974956 ~ 19981557 (-)
AMCG00015761 herc3 other upstream 301265 20227367 ~ 20279644 (-)
AMCG00015800 NA other upstream 2754592 22680694 ~ 22702249 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other upstream 3817688 23743790 ~ 23746703 (-)
G101067 NA other upstream 5066851 24992953 ~ 25000890 (-)

Expression


Co-expression Network