AMCG00016125


Basic Information

Item Value
gene id AMCG00016125
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 8355679 ~ 8357486 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016125
atggCAGCGATTGCAGACTTCAAGTTTTGTCTAGAAGACTCTGCAACTTTCAGGTGGAAATATACCCCTGACGAGAAGGAGAATGAGCGGCAGTACCTGCTGGACTTACAGTTCATCTGTGACAGGCTGCAGAAACTCTGCATTAGCGATGTGGTCCTGGCTAAGCCCTCAGCAGAGGGTGCCCGGTGCTCCCGGCAGGGCAAGAGGAAGGAGTCGCGAATCATCAACGTGTCATTCACGGATGAGATTCAGCTCAACAAGGCCAAGAAGACCTGGAAGCCTACAATTAAGCAGGCTCCCACAGTGAGTGATGACCCCGAGGTCATTAAGACCCAGGAGCTGTTCCACAGGGTGAACGGTATCCTGAACAAGCTGACCCCACAGATGTTCCAGCCGTTGATGCATCAAGTGAACGAGCTGACCATCAACATGGAGCAGAGACTCCAGGGTGTCATGGAGCTCATCTTCGAGAAGGCCATCTCCGAACCCAACTTCTCTGCCACATACGCCAATATGTGCCAGTGCCTTCTGAGAGTGAGAGAAGGAGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016125 True 552 mRNA 0.53 4 8355679 8357486

Neighbor

gene id symbol gene type direction distance location
AMCG00016118 NA coding downstream 216616 8138734 ~ 8139063 (-)
AMCG00016111 NA coding downstream 320927 8030925 ~ 8034752 (-)
AMCG00016107 frem2b,LOC106581006,LOC106612873,LOC108433801 coding downstream 739381 7608507 ~ 7616298 (-)
AMCG00016108 LOC107730863,LOC107704782,LOC103363427,LOC101479746,LOC102203644 coding downstream 781199 7529911 ~ 7574480 (-)
AMCG00016105 NA coding downstream 829425 7520166 ~ 7526254 (-)
AMCG00016127 NA coding upstream 58764 8416250 ~ 8433185 (-)
AMCG00016129 LOC106612894,LOC102298628,LOC102206684,LOC101482631 coding upstream 77634 8435120 ~ 8494583 (-)
AMCG00016130 nbeaa,nbea,LOC107691681,LOC107588988 coding upstream 236604 8594090 ~ 8644348 (-)
AMCG00016131 nbeaa coding upstream 299716 8657202 ~ 8671178 (-)
AMCG00016133 rfc3,LOC107589808,LOC107728889,LOC107577751 coding upstream 453361 8810847 ~ 8820708 (-)
G11346 NA non-coding downstream 23876 8326182 ~ 8331803 (-)
G11345 NA non-coding downstream 34637 8320697 ~ 8321042 (-)
G11314 NA non-coding downstream 181705 8173689 ~ 8173974 (-)
G11309 NA non-coding downstream 217009 8136414 ~ 8138670 (-)
G11300 NA non-coding downstream 230296 8124990 ~ 8125383 (-)
G11482 NA non-coding upstream 698418 9055904 ~ 9059100 (-)
G11571 NA non-coding upstream 956514 9314000 ~ 9314447 (-)
G11633 hmgb1,LOC105901051,LOC103353583 non-coding upstream 1078316 9435802 ~ 9498753 (-)
G11650 NA non-coding upstream 1186022 9543508 ~ 9543743 (-)
G11658 NA non-coding upstream 1232249 9589735 ~ 9594953 (-)
G11326 NA other downstream 161247 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 231646 8119221 ~ 8124033 (-)
AMCG00016110 ufm1,LOC107701138 other downstream 602242 7680911 ~ 7753437 (-)
AMCG00016074 NA other downstream 3425779 4903856 ~ 4929900 (-)
AMCG00016049 NA other downstream 4435176 3886298 ~ 3920503 (-)
AMCG00016134 NA other upstream 466059 8823545 ~ 8827760 (-)
AMCG00016176 NA other upstream 2476926 10834412 ~ 10847811 (-)
AMCG00016194 NA other upstream 3408666 11766152 ~ 11781547 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other upstream 3474942 11832428 ~ 11947322 (-)
AMCG00016211 NA other upstream 3965675 12323161 ~ 12329033 (-)

Expression


Co-expression Network