AMCG00016127


Basic Information

Item Value
gene id AMCG00016127
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 8416250 ~ 8433185 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016127
ATGAACAGTGCGACGAGCCTCAAACTCAGGAAGGAGCGGTCAGTGGATGAAAGAGAACCTGGCAAGAGAGCAGTGCCAGAGATCCCCAAGTCTGAGAGGAGCAGAAATGTCGTGTGCTCCTTGAAGGAGTTTAATGAGTACACTGATTACCTGAAGACAATCAAGATGAACTGGGAGAAAAGCAACAGGCAGCAACAGAAGGAGCACGTGAAACAGTTCCTGATCTTGCAGGAGCAGAAGATCATCCCAGAGGACGTGGCGGTCACAGACATGAAGGAGTGGCTGCTGGAACAGGGCTGGAGCACGTTCTGGCAGCAGGGCGAGGCTCGCAGACTCAGGTGCCAGCAGAGCCGGCCTAGGGCAGACCAGCCTCTGAGCAGAGCTGAGCAGGCCGACAAGATGAAGGAGCGTCAGatgctgcaggagctggaggtGGAGGTCCGCACGGAGCTGAGGCTGGAGAGACACTGGAAGGTCACTGTGGAGGAGCTGGACACCATCGCTGAGTGCGTAGTGGAGAGTGTGGTGCCGGAAGTCAACACTACTGTTTTGCCCGCCATGCTGGACAGGGAGCAGGAGTCGGAGGGGGAACGTGTGTCCCTCACCTCCACAGAGTGTCTCAGCAATGACAGCCTGACCCCTCACAACAGTGCCAGTAGCAGCAGCTCCAAGGAGTGTCTAAACGAGTACAGCACCAGCTCCCAGTCCTTCTTGTGTCCCCCGGACCAGCTGAGCCCCACTGTGCATGATGACACAGTTGAGTGCGAGAGCTCCCCCCTCCCAGACCAGCAGGGCGTGTCAGTGGGCAGCCAGGCTTCGTCCCGCAGTGCAGAGTTCCCCTGTGCCCAGGAGAGCAGGCCGGAGGCAGTGCTGAGTGACTGCCTCATCCTGCAGGAGGTGGAGATGGAGACAGGGAGCTGTCCTGCCTCTGCCCTGGACATCATCCCATGTGAGGAAGAGGCTGCTTGCATGGACAACAGCGGCTGCCCGGGTTCCCTATCCCCTCTGAGTCTGGGGCACACACTTGTGGATCCGATCTGTGGCATCGTGGCGAGGGCAGCTGATACCCTGCTGCCTCCCCCAGTGCCATCTGATCCCAGAGTCTCGGCCCAGACCCCCCCCTGCCACAAGGCGTCCTCGGAGGCAATTCTCTCCGGGACTGAGGACATCGGACAGATTGTGCAGGGATTCCAGACCTCCTCTGCCTTGTCCTCTGCCTCGTGTTCATCGTCCTCCTCCGGGGTGTCGTCCGTGGCATCTTCTCTGGTGGAGGATATGATTACTGAGCTGCTCCACAGGCTCAGTACCGAGCGCAGCGCTGTCAGTAGGATGGCGGAGGATCTTGTGCAGTCTGTGCTGCAGAACTTGTCAGAGAACTGGGAGCTGAGCATAGCACTGGAGCAGCAGGGTACAGGCAGGGAGGGCCTCCGCTCTCACTCCGCCAGAGTCAGGGCAGCTGTGAGCTCGGCCCACCAGCAACTGGTGCAGCACAGTGGCTCCCCGGACGCCCTGAGGAGGGCGCTGAGCTGCGGGAGTGAAGACCTGAGAGTGGACATCACCAGCACCGTTGTGGAGCAGCTGAACGTGGCCTTCCTGGGCTCGGGCCGCTCCCAGAGCTCCCAGAGGGTGACCAGCCCGGTGGCCAGGGAGCTGCAGTCCAGCTCTGAGACGACGCTCCGCAGGGCATCTGTGCCAGTGGAGCTGGTGAGGCCCAGCTCCAGCCTGCCACCGCAATCCCCCTCCGTCATGCCCAGCGACACCGAAGAGGATGAGGAGCAGCTGCCCGCCAGCCTGGCTGTGACGCCTACTGCGGAGCTGCCCACACAGCCAGGAGCCGCAGGCCAGGCCGGACAGGAAGAGCCTGAGGATCTTACAGCAGGAACTACGGAGGTGCCAGGAAAGCACAAACCCTCAACTAAGGAGCGCATTCGTCTCTTTTGCTGCCGGATCTCGAAATCTCTGTCACAGCTGCGCATTGTGAGGGTGACGCCTGAGCCTCCCAGGCCGAAGAGCATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016127 True 2019 mRNA 0.61 9 8416250 8433185

Neighbor

gene id symbol gene type direction distance location
AMCG00016125 NA coding downstream 58764 8355679 ~ 8357486 (-)
AMCG00016118 NA coding downstream 277187 8138734 ~ 8139063 (-)
AMCG00016111 NA coding downstream 381498 8030925 ~ 8034752 (-)
AMCG00016107 frem2b,LOC106581006,LOC106612873,LOC108433801 coding downstream 799952 7608507 ~ 7616298 (-)
AMCG00016108 LOC107730863,LOC107704782,LOC103363427,LOC101479746,LOC102203644 coding downstream 841770 7529911 ~ 7574480 (-)
AMCG00016129 LOC106612894,LOC102298628,LOC102206684,LOC101482631 coding upstream 1935 8435120 ~ 8494583 (-)
AMCG00016130 nbeaa,nbea,LOC107691681,LOC107588988 coding upstream 160905 8594090 ~ 8644348 (-)
AMCG00016131 nbeaa coding upstream 224017 8657202 ~ 8671178 (-)
AMCG00016133 rfc3,LOC107589808,LOC107728889,LOC107577751 coding upstream 377662 8810847 ~ 8820708 (-)
AMCG00016137 NA coding upstream 547895 8981080 ~ 8990420 (-)
G11346 NA non-coding downstream 84447 8326182 ~ 8331803 (-)
G11345 NA non-coding downstream 95208 8320697 ~ 8321042 (-)
G11314 NA non-coding downstream 242276 8173689 ~ 8173974 (-)
G11309 NA non-coding downstream 277580 8136414 ~ 8138670 (-)
G11300 NA non-coding downstream 290867 8124990 ~ 8125383 (-)
G11482 NA non-coding upstream 622719 9055904 ~ 9059100 (-)
G11571 NA non-coding upstream 880815 9314000 ~ 9314447 (-)
G11633 hmgb1,LOC105901051,LOC103353583 non-coding upstream 1002617 9435802 ~ 9498753 (-)
G11650 NA non-coding upstream 1110323 9543508 ~ 9543743 (-)
G11658 NA non-coding upstream 1156550 9589735 ~ 9594953 (-)
G11326 NA other downstream 221818 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 292217 8119221 ~ 8124033 (-)
AMCG00016110 ufm1,LOC107701138 other downstream 662813 7680911 ~ 7753437 (-)
AMCG00016074 NA other downstream 3486350 4903856 ~ 4929900 (-)
AMCG00016049 NA other downstream 4495747 3886298 ~ 3920503 (-)
AMCG00016134 NA other upstream 390360 8823545 ~ 8827760 (-)
AMCG00016176 NA other upstream 2401227 10834412 ~ 10847811 (-)
AMCG00016194 NA other upstream 3332967 11766152 ~ 11781547 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other upstream 3399243 11832428 ~ 11947322 (-)
AMCG00016211 NA other upstream 3889976 12323161 ~ 12329033 (-)

Expression


Co-expression Network