AMCG00016605


Basic Information

Item Value
gene id AMCG00016605
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25956131 ~ 25958833 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016605
ATGGCGACCCAGAAAATGGCACAAAGAGACACAGGGGCTGCACAGAGAAAGCTGGAGGagggaaaggagagagggatggaggagaGAGGGTTGGGTGCTACAGAGAGAAAGGCCGGGCCGCTGGACGGGGTGGCGACCATGGCTCAGTGCTATCAGAGGTTCAACCCTGCTGCCTACCTGCAGTACAACTACACCCCCCCTCGTGCCGATTTCTCTCGGTCTGATAGCATTGTACCCTGGAAGCTGGACTGCCTGCACCGCGCTTTCACTCAGGgtgacATAACCGGAGACACTCTGGTGGACATTGGCTCTGGCCCCACGCTGTACCAGGTGCTGAGCGGGTGTGAGGTGTTCCGGCGGGTGCTGCTGACCGACTTCCTGCCAGTGAACCGTGCCGAGCTGCAGCGCTGGCTGGAGGATGGAGAGGGCGGCTTCAACTGGACACCATACCTGCAGCATGTCTGCCAGCTGGAAGGCAGGGGCTCGCAGGCCTGGCGTGAGAAGGCTGCCCGTCTGCGCTCAGTGGTCTCAGACGTGCTGCCCATCGACGTCCACAGCCCAGCACCCCTGCCCCCCGGCGCCCTGGTCTGCCCTGCTGACTGCCTTGTTTCTGCTTTCTGCCTGGAGGCAGTCAGCTGTGACCGACCCACCTTCACCCGGGCACTGGGCCACATCTCCTCCCTGCTGCGGCCCGGTGGGCACTTCCTGCTGATTGGGGCGCTAGATGAGAGCTACTACCTGGGCGGGCCTGGCGTGCGGATCCCTGTGGTGCCCGTGGATGAGGCCTTTGTAAGGGCCAGCCTGGGAGACTGTGGCTACAGTGTGCTG

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K00553 PNMT; phenylethanolamine N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016605 True 828 mRNA 0.63 3 25956131 25958833

Neighbor

gene id symbol gene type direction distance location
AMCG00016604 NA coding upstream 23074 25929577 ~ 25933057 (+)
AMCG00016606 NA coding upstream 37986 25906124 ~ 25918145 (+)
AMCG00016603 NA coding upstream 68902 25879346 ~ 25887229 (+)
AMCG00016586 NA coding upstream 396924 25553480 ~ 25559207 (+)
AMCG00016587 NA coding upstream 414086 25534049 ~ 25542045 (+)
AMCG00016602 pgap3,LOC107694083,LOC103358570 coding downstream 2713 25961546 ~ 25973771 (+)
AMCG00016609 NA coding downstream 24124 25982957 ~ 26018921 (+)
AMCG00016608 npepps,LOC106587691 coding downstream 97936 26056769 ~ 26083264 (+)
AMCG00016612 kpnb1 coding downstream 128066 26086899 ~ 26096008 (+)
AMCG00016613 NA coding downstream 140539 26099372 ~ 26102713 (+)
G14556 NA non-coding upstream 20550 25933951 ~ 25935581 (+)
G14510 NA non-coding upstream 277782 25672259 ~ 25678349 (+)
G14502 NA non-coding upstream 344442 25604639 ~ 25611689 (+)
G14455 NA non-coding upstream 533105 25422443 ~ 25423026 (+)
G14448 NA non-coding upstream 589755 25363896 ~ 25366376 (+)
G14623 NA non-coding downstream 206797 26165630 ~ 26165982 (+)
G14695 NA non-coding downstream 254461 26213294 ~ 26215317 (+)
G14703 NA non-coding downstream 275493 26234326 ~ 26304342 (+)
G14704 NA non-coding downstream 280337 26239170 ~ 26241244 (+)
G14755 NA non-coding downstream 421218 26380051 ~ 26382420 (+)
AMCG00016607 NA other upstream 5955 25940528 ~ 25950176 (+)
AMCG00016598 NA other upstream 197205 25725253 ~ 25758926 (+)
AMCG00016584 NA other upstream 551291 25370296 ~ 25404840 (+)
AMCG00016566 NA other upstream 798670 25150348 ~ 25157461 (+)
G14361 NA other upstream 822252 25133198 ~ 25133879 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 326969 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 468506 26427339 ~ 26433656 (+)
AMCG00016640 NA other downstream 531105 26489938 ~ 26499242 (+)
AMCG00016638 krt222 other downstream 568486 26527319 ~ 26548212 (+)
AMCG00016635 NA other downstream 641260 26600093 ~ 26657425 (+)

Expression


Co-expression Network