G14556


Basic Information

Item Value
gene id G14556
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25933951 ~ 25935581 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18082
tcatactacacactacacacacacacacacactacacacactctcacactacacactacacagacTACACAACATTCTAGGGCTTTTACTCATTAGAGTTCATAATACACCAGTATTGTAATATACTACACAGTAGTAGCTGTATTATTGTCATGGTTTCTAGAGTATGGAAATCTAAAAATGTCTCAGCCATCAATGCACAGATAATGATAAGTCTTATTATGATTGCCTGAGGGTCAATGCACAGCTGCCTGAGCACAGGTGGGGTTAGGCAGGTTCAAAGCCCCCGGGGAATCTGCTGCTTGCTACACAACAGGGACTGGTTACCTAGCACCTGTGTGCGCAGTGCTATATATAAGAGCTGCCTAAGTCATCTCTGTATTGCCCCCCTAGCTCTGAGTGCAATGTAGGCCTCACATTATGAAACATTTCAAGCATTTGTGAAAAGgcaattgtactgtatttactaTGTTAGTACAAGGGATAGAGTTGAATAACAGTCAGCAAATGTTATTTGGGATGATCTAAAACTAAATTCTTCCATTCCAAATTAGAATTCAGAATAATGAGCCATAatgaattatacaattaattcaACTGTGGGAAGAAATGATCATAATCGGAAGCAAAACTGAATATCCTGTGTCGGCCCATATCATTTCATTCTGTTTCTCCTCCTCACTGCCTAAAGCAATCATTCCAACCCAGAGGCCCTGATCAGTGATTTAGACTGGAATGGGACAGATTGTTGTTTCAGACTGTTCTAAAGACCAGTGACCTCTAGTGTTGAGAACTAATCTGAATTTGCaaaagctttgttttcttcctgttttcttaAAGTTACGGCTCAAGTTTTAAGGTACCTACCCAGTTAGGACAAATAAAAGTGAGgcaaaagagaaatgaaaataaatgaatgcctTTATCACTTAAATGGCCAGAGTGTATCTAAACATTGAGGGTGGGTCACATTTTGCACTGAAGCCGAAGCAGACATTCATACAAATTGTAGAATAATTGGACACCGTGACCATTTATGTGAACCAGTGTGAGTATAAAGGATAGTGAGAATCGTGGAGATTGGTGACTTATGTTTGTAAGCACTGGGTGTAGTAAGGAAATCTCAACCACCAATTTCTTGAAATTACTTACTCATTACTTTCTTACTTTGTCTCTGTATCCTGTGCACACAATCTGGAAATTCAGATCActgttttgaagcatttgcaGGTATGCATGTCAGTTATCCCCTGGAGGATATCTGTCAAAGTAGAGAGGACTTTGGGTACATATTACTGTACACCAGAGTAAAGtacttttttgttagtttgtcttgtttttacattaactAATCAAATTTGAGagatctgcaattcaatttaagatatcttaaattgtatttcctgatatctctaaatgaaagTTTGGCTTACCGTAGATCCATGGCAAACAAGGTCTGTGCTTATTAGCAGGCACAGATACCCATTATCCAACTTATCATCAACACTATATCCCATTCACTGGCAGATGGATGCATGTATCTCCAGTACTGATGAATGCTGCCATTTCCCTCATACACATATAAACCTgcaatgtatatgttttgta

Function

GO: NA

KEGG:

id description
ko05206 MicroRNAs in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
TU18082 True 1608 lncRNA 0.38 2 25933951 25935581

Neighbor

gene id symbol gene type direction distance location
AMCG00016604 NA coding upstream 894 25929577 ~ 25933057 (+)
AMCG00016606 NA coding upstream 15806 25906124 ~ 25918145 (+)
AMCG00016603 NA coding upstream 46722 25879346 ~ 25887229 (+)
AMCG00016586 NA coding upstream 374744 25553480 ~ 25559207 (+)
AMCG00016587 NA coding upstream 391906 25534049 ~ 25542045 (+)
AMCG00016605 NA coding downstream 20550 25956131 ~ 25958833 (+)
AMCG00016602 pgap3,LOC107694083,LOC103358570 coding downstream 25965 25961546 ~ 25973771 (+)
AMCG00016609 NA coding downstream 47376 25982957 ~ 26018921 (+)
AMCG00016608 npepps,LOC106587691 coding downstream 121188 26056769 ~ 26083264 (+)
AMCG00016612 kpnb1 coding downstream 151318 26086899 ~ 26096008 (+)
G14510 NA non-coding upstream 255602 25672259 ~ 25678349 (+)
G14502 NA non-coding upstream 322262 25604639 ~ 25611689 (+)
G14455 NA non-coding upstream 510925 25422443 ~ 25423026 (+)
G14448 NA non-coding upstream 567575 25363896 ~ 25366376 (+)
G14445 NA non-coding upstream 573143 25360471 ~ 25360808 (+)
G14623 NA non-coding downstream 230049 26165630 ~ 26165982 (+)
G14695 NA non-coding downstream 277713 26213294 ~ 26215317 (+)
G14703 NA non-coding downstream 298745 26234326 ~ 26304342 (+)
G14704 NA non-coding downstream 303589 26239170 ~ 26241244 (+)
G14755 NA non-coding downstream 444470 26380051 ~ 26382420 (+)
AMCG00016598 NA other upstream 175025 25725253 ~ 25758926 (+)
AMCG00016584 NA other upstream 529111 25370296 ~ 25404840 (+)
AMCG00016566 NA other upstream 776490 25150348 ~ 25157461 (+)
G14361 NA other upstream 800072 25133198 ~ 25133879 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 848854 25080674 ~ 25085097 (+)
AMCG00016607 NA other downstream 4947 25940528 ~ 25950176 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 350221 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 491758 26427339 ~ 26433656 (+)
AMCG00016640 NA other downstream 554357 26489938 ~ 26499242 (+)
AMCG00016638 krt222 other downstream 591738 26527319 ~ 26548212 (+)

Expression


Co-expression Network