Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016604 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 25929577 ~ 25933057 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005886 | plasma membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016604 | True | 816 | mRNA | 0.58 | 5 | 25929577 | 25933057 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016606 | NA | coding | upstream | 11432 | 25906124 ~ 25918145 (+) |
| AMCG00016603 | NA | coding | upstream | 42348 | 25879346 ~ 25887229 (+) |
| AMCG00016586 | NA | coding | upstream | 370370 | 25553480 ~ 25559207 (+) |
| AMCG00016587 | NA | coding | upstream | 387532 | 25534049 ~ 25542045 (+) |
| AMCG00016588 | rpl19,LOC107084780 | coding | upstream | 409412 | 25515479 ~ 25520165 (+) |
| AMCG00016605 | NA | coding | downstream | 23074 | 25956131 ~ 25958833 (+) |
| AMCG00016602 | pgap3,LOC107694083,LOC103358570 | coding | downstream | 28489 | 25961546 ~ 25973771 (+) |
| AMCG00016609 | NA | coding | downstream | 49900 | 25982957 ~ 26018921 (+) |
| AMCG00016608 | npepps,LOC106587691 | coding | downstream | 123712 | 26056769 ~ 26083264 (+) |
| AMCG00016612 | kpnb1 | coding | downstream | 153842 | 26086899 ~ 26096008 (+) |
| G14510 | NA | non-coding | upstream | 251228 | 25672259 ~ 25678349 (+) |
| G14502 | NA | non-coding | upstream | 317888 | 25604639 ~ 25611689 (+) |
| G14455 | NA | non-coding | upstream | 506551 | 25422443 ~ 25423026 (+) |
| G14448 | NA | non-coding | upstream | 563201 | 25363896 ~ 25366376 (+) |
| G14445 | NA | non-coding | upstream | 568769 | 25360471 ~ 25360808 (+) |
| G14556 | NA | non-coding | downstream | 894 | 25933951 ~ 25935581 (+) |
| G14623 | NA | non-coding | downstream | 232573 | 26165630 ~ 26165982 (+) |
| G14695 | NA | non-coding | downstream | 280237 | 26213294 ~ 26215317 (+) |
| G14703 | NA | non-coding | downstream | 301269 | 26234326 ~ 26304342 (+) |
| G14704 | NA | non-coding | downstream | 306113 | 26239170 ~ 26241244 (+) |
| AMCG00016598 | NA | other | upstream | 170651 | 25725253 ~ 25758926 (+) |
| AMCG00016584 | NA | other | upstream | 524737 | 25370296 ~ 25404840 (+) |
| AMCG00016566 | NA | other | upstream | 772116 | 25150348 ~ 25157461 (+) |
| G14361 | NA | other | upstream | 795698 | 25133198 ~ 25133879 (+) |
| AMCG00016558 | rpl21,LOC107591224 | other | upstream | 844480 | 25080674 ~ 25085097 (+) |
| AMCG00016607 | NA | other | downstream | 7471 | 25940528 ~ 25950176 (+) |
| AMCG00016625 | mllt10,LOC106942732 | other | downstream | 352745 | 26285802 ~ 26302514 (+) |
| AMCG00016633 | NA | other | downstream | 494282 | 26427339 ~ 26433656 (+) |
| AMCG00016640 | NA | other | downstream | 556881 | 26489938 ~ 26499242 (+) |
| AMCG00016638 | krt222 | other | downstream | 594262 | 26527319 ~ 26548212 (+) |
