G14510


Basic Information

Item Value
gene id G14510
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25672259 ~ 25678349 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18012
ttaataatatagttatatatttatttatacatatatattcatagcgattaattataaaaaaaagaaaaacatgtacagCAATTATAATTCAAATAGTCACAGATGATCATTCTCACGATCATTAGCTCCACAACATAACCCCCTCCCAACCCTTTACAGAGTGAAGAGTGACACTGGCTTCACACTGGATTCACACATTGTTCAATCTGAATCCAATCCACATGATGGTATCAGTCTCATACAAAGGAAGCAACACCACTCTCAAAGCCAATTGGATAGCACAATAGACCTCTAACTGtaaataccaaaaaataaaaaaaggaaattatattttttatgacattTGTAATATGGAAATACTAAGGGATTATAACTATCCAAAGCCAGTTTTTCTGTTCCCCTTCTGGTACCAAACATACTGACTTTAGGGTTCTTCCAGTGCAAGTGAGCCTTTTtacctttaattatttatttatgataagaaagaaaacaacgtTTTTTGAAGGCCATTCAGTCATTTGCATTGAAATGCTTTCTCATTAAATGGCAACAGTCACACCAGTGGACTTATTTATTGAAAGTGTGTCGTGCAAGTCTGTACAATCCTTCACAATGAAGGACAGGCAGTTAAATCCAGGCAGGTGGGAGGTTATGGTTCATTCATCTTTGCTACATGTATAATTCTTGTCACTATTCTAGcacaggaagggagagaggagaggtcAGACTGGAcaaattcaaatgcaataaTGGTTTTGACTCACTTCCTCTACTGCGCTTCAGGCTTCAGGAGATCAAATCTGAAGTTTGTTGCCACCTAGCTTAAATGTTTCACAGTTTAGGAGACAGAGTTGAAAACTGACAATAAAGAGCAGAAATAAAAAGAGGTATTTAAAAATTCTAAATATTATTGAGTAattaccccccccacccccaccaaaaaaaaaaaaaaaacctatgaATACTCATTTCATTGTCAACTCGAATTAAAGAACCTGAGGGATCTACATATTGCTTGGTTTTGACaggtaattacattttttttacctgtaCAAAACTCTCATTTATATACCTAGAGTACTACTTCATCACACAGATGGGAATAACTGCGTGTAAATGAGCAAATCCTCTGCTGTCTTCAGACTGTCTAGTACGAACTTGCCCTGGGTCTGTaatgaaggaaaacagaaaTCCTGCTGTACAGTACTATCCTGCTGGCAAAAAATCAGAAATCCAATGTATTGTTCCCCTCATGAAGAAGTGGTACTGTTAGGTACACTATAAAGATACCTATACGTAGAGTGTGAATATAGTAAACGTAAAGTGTACTTaaatttatttctttttcattaggTTTTACACTTGACATCCGTATTCAAGTTAAAACACTTGAACTATACAGCGTCTGGACTTATAGCATAGCCAGCAGAGAGCAATATCTAGAAAGTACCAAATAGCTATGCAATGGGAGTCTTATTGGTTAACctataataaagaaaagttaAAGACAGCCATAGGCAAGCAGTCCGGCGGTGAAGGGGTTAAAGGCCAGCACTGGCTTGCCCCCCCACTGCACCACTCTGTAATCTGCTGCCATGGCACCAAAAGGGCTGGCCTGGCCTGGGGGATTGTTCAGAAACGCTGCACTCCCATATCCACTTCCAAAACTCATCTGTACAagtgaataattaaaactaaagacagtttcatttcattcagcagacaaatgtattttttaaaaagggggCAGATTTTCAGTGTTAGAGAGAAAAACATTCTGCTTAATTTGGGGaaatactgaaattattttaaaggtggTTTTCTGCCCACCCCCACTTCATGAAACtggaatatttttaaaaggatatTATCATGCCATTGTACTAGCTATACTCAACAGAGCTACAGAGCCACTGGTGTCGCTGTGGATCACACTACAGTGTTGAATGTGTTCTGAATGTTTTACACAATGTTGTGTGCAGATGGTAGAAAAGCACATACATTCCCTGTGCACTGAAGTCAATCTACCCTTTAAAAGCTGAGTCTTGGGCCCAGTTCTTAAACCAAACATTATCCTACTTTAAGATAGAAGTCTTTCATGTAGCTAAATGGTTCAGTCAATTTTATAAAACTTCCTCTCTGAGATCATGGCTTTAGGACACTGATAGGCAGCCCTGGTCATGTAGATCTGACAGATCTTACAGCTTGTGTCTCAGTTATGTAACTGGCTCGTGTATTTGCTAAAACGTAACCAACCTTTGTTTACAGGTTATTAACAGGTGGGTCTATACAGAGAGCTGCAACAACTACAGTTCGCAATGGAAACATAACGATgattcaaaaaaagaaaaaggtaaacTAGTTGGCAAAAAACATGTCAGTTTCTTGTTCCAGTAGTGTAGCCTGTTGTGCAAATCAGACGAGGCCAACACTGTCCGCGTGTGAGGCTACAGAGACCTGTCCGGACTCTCAGTCACTCTCCAtgggaaagagagaaagcaatGTAGAAAAACTGcataaaggaaaggaaatggaGAGACCGCTAGAAAGACCAATACAAGCCTCCCTCGGGTTACAGTCCCAGATGCGTGTTTCCCATGGTGAGTGTTCACAGTATTGTCACAGTTTACTCTCCTAGATATTCCAGTACACTTCATTTGCTCTCACATGATTGTCGCTAGTTTGTATCACACTTGATCATGCCCGTCTCTGTGTTTCCGGTCTCATGATTGCACTATGCCTTacaattaatttcctttattcCACGGTGTATGAATGTTAAAATCTTACAAGGAGATTCAACTCCCCTCACTTCTCACTGCTGTCTGAATTCTGCTCTTTTCTACCACCTCCCAACTTGGAAGACACATGGTGCACAAAGATGCTATTAAATCAGTAACAAATGGATAatagcaaaaacaataaaacagacagatacataaatacaatacaatacattcaaatttaagaagaattgaaataaaatgtcctttttggatatatatatatatatatatatatatatatatatggtaatgCACAATATATTTGTAGGTTGCTTCAATTATTCATATTACTATAATACCCTTAATGTATGTGCAGAATTAACTAGTGAGCACTAATTAAATGGTTTGTTATTTGCATTAAACGGGCAAAACTGCCTTGCAGTGAATAGCAATACTGAACCTTTTAGCGACATTAACTACTCATGGATGGTCCATATAGatgatttacatattttttgggCCAGTGGCACCTCCTCTTATTTCTTATAATTAAGGAATAATATTGTTCTCTCCTGCTTAATATTATTGCCGGTTTGTTACTGATTTAGTAGACACTTCAAACAACAGGTCCTAAGACACGTTGCACGTTCTTGCTTGCGTACTCACTTATCCCAGGACTGGGGCAGCTCGGGCAGAGGCCACACTGTCCTGTTGCTCCTATCTGATCATATTGGTGAGATTGGAAAGAAACGTATTAATAAAtagaaagggggagagaaaaacTGAGATGAGATTCAGCCTAGAAGGGGGAGGCTGCAAAGAGAGGAAAAAGATTTACATCATCCCAGAACAGACTCCCATGGTGTTAAAAGAAGCTTGCTTTCTCCTCCCTGCCTCACGGTACGCAGACTACAACAGAAGGGACACAGGATGCTCCGCCACATGACCTTTGCACTCCCAGACCCCTGTGGTCTCCAACAGTCAGAAAATCTGCCCCTTCTGCATGACGGGCATCAAGTGGATTTCGACAAGCCgtctacttatttatttcctcataGGAGCTGGCCATTTTACCtatttaattattctgtatgatttggtttcatttaTAGTCTGTGCCCTTTTCTGAAACTTACAAATGTGTGCAATTTTAGCCCAGCGTAAGCCTTCGCCTCATGAGACTTTgtgcaaacaaaccaaaaagaaaacaaaaacagaaaaatcttGCTCAACAGTTCATGCTAGATTGAAAAAAGTCCAGGATGTGTAAGGGTGTCTAATCCAGTCTTCTGTGCAGGAAGATGTATAGGTCCTGCCAGTCACAGTGTATATGATTGTCCTCTgccattatgttttgtttaatcctGGACAAGGTCAGGATGGCCATGCTTTCCCCGTTATAACATCGAGTGCAAATTCATCTCATCGTTTGTTGAACAACTGTGTAACTCTCTGTCCCGTTCTCGACAGTTTTCAACAAATAATTAGCTTCGTCTTCTACCAACCTTTTCTAATGATCAACTAAACTTCCTCCTGGGAGGTACTGAGCCATGACAGGACACAATATGTTTAGTCTTTATTCAGAAAAGTGTAACCAGCTTGAAAAATGAATGAGCATCAGTGGGGGGAAAACAAGCCTTTCCTTGATCCGAGCATCTGTAGCTTGTCGCTGTGCTCACGGCCTCcatgttgtcttttttattcCATGCCTGGAGCAGAGGTTTTACATCTGGGCTGAACAGTGAGATTCAGTGGAGTGTAGTCCATGACTGAGTGGCAGAAGCTCCCACAGATaagatatatacagtacttacatatgtacacaattatattaaaaaactatAATTGAAACATGCAACATTTGgcattttctcagttttttttcttccttaaatCTCATTGttcctttataaaaaatatatgaatttctTAAGTACTATGTGGAATGGAGAGGGGGacgttgtgtctgtgtgtgttgaggggCACCAGAGCTACACAGGATCAAGGGCAGCGAATCAGGAAGTACTgggaagagggagaggtagGGGGTCTGTTACTCATCATCCACAACAGAGAGTCCTCACAACATCTTTCCTCAGTGTAGTAGGGGAGGTTATAAATCTGCCCCTTTATGCCTAGTTGTCAGAGTGGGGTCAAttcagagatttattttaattgactgattaaAATAGACTAGAACCGAATATACTTGCTTCACCAGCTATGAGGAGAACCACACAATCCAAGATGGGTGTGCCTTTCAAATGAACCAGTCTGTTAAAAAGTCATTCTGCGCACTTTGATGGTCCTGTCGAGTTTGAGGATCCCAGAGGCCTGTTTTGGAAGGACACCAGTTATTGAGCACACGGTGGCGGTTGTATTTCTCCATAATATCTTATAaggaagttcctgtgcatcctCTGTCAGTCCTTTACAAATTGTGAGAGAACACGATCTCATGGAATACCTgtatctgaaaaaacaaactgcactcAAAGCAGACTTTCTAACTTCTAGTAAACCCCCACagaaaacttgtttttttttgctgaatgaACGCAGTTTACGCTGGTTTGATGTACCCGACAAGACTGGGAACCCTGCTCAGACAACAAGTTAAAAGGGTTAACGCTTTCGTGTATAGGAGGATGACAGACAACCTTTGATTCTGTGCGTCTGGTGAACGGATTGGCTTCGATTACATTTCAGGTGGATTACAGCCACTGCGCAGAGCCAACAAACTCGCTAATAGTGCATCAGAAGTAGGGGAACAAATCAATATGCAATGAAGCATCTCCCTGACATGAGGCCGTGTCAGAGAAGCCTTGAGCCTGCAAAATCCAAACATTCAATATTGGGAAGAATTAGTCTGTTGCAAAATCATAAAGGGAAGACGAGGGAGTCCGTTAATGCTATGACCTGGGAATGTTGACATGATCCTGTGTGCGCAGCGTGTGAGGATGGGGAGGAATGTCGCAGGCGTTGCCCTGTGATGTATTTTGGTGTCATCCTGACTGTCGGGGGGCCCCCAGCTCCCAGAGAAACCTGGCACCactgtggggggtggggatgggggAGCAAGGTGCTAGGAACATAGGACACGCACACACCTGTGGGCGGAGGGCGCACGCATGTGTGGGATACTCACACAGCTACAGTGTCTCTAGGTATCTGTACAGTGTCCGGGAGGTGGGgagtggaggtgggggggcagcagtgACATCATAGCAGGATGCAGCAGCGGCAGAATCTCTGCCTGCTCCCTCCCACCGACGGGGGTGGGGTGACAGGGGCGAAGTAGGCGTGGACTTTGATATTGGGGAGATGCGTc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18012 True 6057 lncRNA 0.45 2 25672259 25678349

Neighbor

gene id symbol gene type direction distance location
AMCG00016586 NA coding upstream 113052 25553480 ~ 25559207 (+)
AMCG00016587 NA coding upstream 130214 25534049 ~ 25542045 (+)
AMCG00016588 rpl19,LOC107084780 coding upstream 152094 25515479 ~ 25520165 (+)
AMCG00016585 NA coding upstream 263353 25407227 ~ 25408906 (+)
AMCG00016571 pan3 coding upstream 409803 25242014 ~ 25262456 (+)
AMCG00016603 NA coding downstream 200997 25879346 ~ 25887229 (+)
AMCG00016606 NA coding downstream 227775 25906124 ~ 25918145 (+)
AMCG00016604 NA coding downstream 251228 25929577 ~ 25933057 (+)
AMCG00016605 NA coding downstream 277782 25956131 ~ 25958833 (+)
AMCG00016602 pgap3,LOC107694083,LOC103358570 coding downstream 283197 25961546 ~ 25973771 (+)
G14502 NA non-coding upstream 60570 25604639 ~ 25611689 (+)
G14455 NA non-coding upstream 249233 25422443 ~ 25423026 (+)
G14448 NA non-coding upstream 305883 25363896 ~ 25366376 (+)
G14445 NA non-coding upstream 311451 25360471 ~ 25360808 (+)
G14444 NA non-coding upstream 313224 25357887 ~ 25359035 (+)
G14556 NA non-coding downstream 255602 25933951 ~ 25935581 (+)
G14623 NA non-coding downstream 487281 26165630 ~ 26165982 (+)
G14695 NA non-coding downstream 534945 26213294 ~ 26215317 (+)
G14703 NA non-coding downstream 555977 26234326 ~ 26304342 (+)
G14704 NA non-coding downstream 560821 26239170 ~ 26241244 (+)
AMCG00016584 NA other upstream 267419 25370296 ~ 25404840 (+)
AMCG00016566 NA other upstream 514798 25150348 ~ 25157461 (+)
G14361 NA other upstream 538380 25133198 ~ 25133879 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 587162 25080674 ~ 25085097 (+)
G14326 NA other upstream 661572 25007962 ~ 25010687 (+)
AMCG00016598 NA other downstream 46904 25725253 ~ 25758926 (+)
AMCG00016607 NA other downstream 262179 25940528 ~ 25950176 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 607453 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 748990 26427339 ~ 26433656 (+)
AMCG00016640 NA other downstream 811589 26489938 ~ 26499242 (+)

Expression


Co-expression Network