AMCG00017332 (tmem110,LOC108435844,LOC106582935,LOC107656046,LOC107755187,LOC103359875)


Basic Information

Item Value
gene id AMCG00017332
gene name tmem110,LOC108435844,LOC106582935,LOC107656046,LOC107755187,LOC103359875
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53960821 ~ 53972368 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017332
GTGACGCGCCGCCGGGCCTGGACTCAGAGTGAGTGAGCACGGAAGCAGCTGGAGGAGCCGCTCGGACCCGCGACACGGACCCGGCAGCACAGTGGACCGGTTCCGCGTCGCCAGCCGCTTGGGAGACGGCCTAACACGCCGTGAGAGCGGAGGCTGTATCCGGGGGGTTATTGTGCGGGGTTTTGGGAACACCGTGGGGCTCGATTGGGCGACAGGATGCCAACCTGCGGGGATGCGCGGGGATCCGGACACTGACAGACCGACCTGCTCGCACCCGGGGCACTGCGTGGGAATAGCGGCCGTGCCCAGCCTGAGGACGTCGGGTCCCGCACCTGCCTGGGCGCATCTGCACCGCGGGTGGCGTGAGGAGCCGGACACAGTGCCTCGGCTGTGTGCTGGGGTCCCAGGTCGGGGTCCTCGGGTGGAGGGCAGCAGGACACGGCACTCCTCCACTGCACACACGCTCTGTATCAGGACACGCATACGTACAGAACAGATGCGTCTGGAGCTCCGGTCTCTGCGAGGTGAAGGGGTGGTTAGAGGACGGCTGCCATGAGCCGGCAGTCCCGGACCGCCAGTCTCTCGCCCGTGTTTTTGTGCGTTTAGGTCGGCAGGCAAACGTAAACACAGCCCGCAGCCCGACCCGCCGGGACCCCCATGTGCAGCCGGTCCCCACACCAGGGTGGCAGGAGAGCGGGGCCCTGGCTCGGGGCTCAGTCGATAATCGATAATCACGCCAGCAGCAACATCCCGCCCTGGCCCATTGATTGGCATTAGCACAGACTGAATAACAACCCCAATCCACAACAACGCTGCAGTCGAGGATAAACGAATAATCGATTGATCAGCTGACTGACTCTTTTTGCGCCCTGAGTGTCTCATCGGTGCATCGCCATCCCTCCACTCTGATGGCTGAGATTGGGCTGAGGCAGATGCTGTCCCGGCCGGCGGAGGGCGCTGTGCGAACCGCCGCCCTGTCCGCCCCGTCCCTGCAGAACTCCTCCCTGTCCGCCAGCACGACCCCTGGCAGCGACTCCCGGGGCTGCGAGAACGGCGCCCTGATGGACAGTTTCGGTATTTTCctgcaggggctgctgggagtCGTGGCCTTCAGTACCCTAATGCTGAAACGCTTCAGGGAGCCCAAGCACGAGAGGCGGCCGTGGAGGATATGgttccTGGACACCTCTAAGCAGGCTATAGGGATgctgttcattcactttgccAACGTCTACTTGTCTGACCTGACAGAGGAGGACCCATGCTCCCTGTACCTCATCAACTTCTTGCTGGACGCCTCGCTAGGCATGCTGGTGATCTACGGAGGGGTGCGCGCCGTCAGCGTGCTGGTGGAGTGGCAGCAGTGGGAGTCTCTGCGCTTCGGGGAGTACGggGAGCCGGTGCAGTGCGGCGCGTGGGTGGGGCAGTGTGCGCTCTACATCCTCATCATGATGTTTGAGAAGGTCTTCATCATCCTCATCCTTCTCATCCCGCAGTGGAAGAAGCTGGCGCTGCTGAACCCTATCCAGAACCCGCAGCTGGAGCTGGCCATCGTCATGCTGATCGTCCCGTTCTTCGTCAACGCCCTGATGTTCTGGGTGGTGGATAACTTCCTGATGAAGAAGGGCCGCACAAAAGCCAagctggaggagaaggaggccgGAGACGACTGCCGGGGCAGCAGCAAAGTGCGCTACCGACGCGCGCACTCCCACGAGGAGTCAGAGTCGGAGATCCTGATCTCCGCGGACGACGAGATGGACGACTCCGACGCGGAGGACGACCTGCGGCGCCTCACCGGCCTCAAGCCCGTGAAAAAGAAGAAGCACCGGCTGGGACTTCCTGTCTGAGGAGCGCCCTGCCCCCTGACATccgacccctgacccctgacctcagcCAGGGTCGAGGGGCCGCGGGACAGAGTGGCGTGGCCCCTGctcttcaaaatcaaacaaacgaATGGATGATCGAGGGAACAAGGGAATGAATGTGAGAGAGAGTATGTAACACACAACGCAAGCGTGTCATGGCAGGAGGCGAGAAGAGGAAGGAAGACTGTACCGCTGCAGCGCTGGAATCCCAACAGAactaattttcctttttcttttttcctgtgtgtttggtttggtttttgtattttccttttcgAGGGACGTCCGAGGAGGCCGGTCCTTTTTTCCCCGATTGGACGCGTCTTCCTCTCGGCAGCAGCCAATCAGAAAACGGGTAGCACCCCCTTATTCTGAGAACGGCTCGGTCCAATCAGGGACAGGGGATAGAGTGGGTGGGTCGGAGGTCCGGTCAACACACCACAGCAACTAACTAGATATCAGTGCTGGGGCTGAGACGCTACCACGGTCACTTACAGCCTgtgaatcaattaatcaattaactgtgACTAATTAAGCCCAACGGTAATTAAATGATGCAGCTGGTTTAACGGGTTCGTATTGAAGAAAAACTGGATGGTTCAAACGGTACCAGATTTTATAGGATCTGCGTCCTGGTGGGACCAGCGCTGATCCGATGCCAGGGATACTGACGTCACACAGTAGTTGCTTTAATGATGTGCTCCTATTTGTCTTCGTCTTCAtggtctcctcctcctcctcctcgctggTACCGTGCTGTCTCTGTGTCATCTGGGCCGGACCCTTCCTGGGGGTGTTGGGTGGGGAGGGCAGA

Function

NR:

description
PREDICTED: store-operated calcium entry regulator STIMATE-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017332 True 2685 mRNA 0.60 8 53960821 53972368

Neighbor

gene id symbol gene type direction distance location
AMCG00017333 impdh2,LOC102785462 coding downstream 70173 53884651 ~ 53890648 (-)
AMCG00017327 NA coding downstream 96277 53857096 ~ 53864544 (-)
AMCG00017328 NA coding downstream 108847 53835650 ~ 53851974 (-)
AMCG00017329 NA coding downstream 132946 53825558 ~ 53827875 (-)
AMCG00017322 NA coding downstream 177097 53782826 ~ 53783724 (-)
AMCG00017338 NA coding upstream 1765 53974133 ~ 53986709 (-)
AMCG00017339 NA coding upstream 23737 53996105 ~ 54008920 (-)
AMCG00017337 NA coding upstream 85661 54058029 ~ 54062385 (-)
AMCG00017341 NA coding upstream 92001 54064369 ~ 54091597 (-)
AMCG00017345 NA coding upstream 123496 54095864 ~ 54097123 (-)
G19918 NA non-coding downstream 45945 53894336 ~ 53914876 (-)
G19920 NA non-coding downstream 63369 53896824 ~ 53897452 (-)
G19875 NA non-coding downstream 92044 53864910 ~ 53868777 (-)
G19873 NA non-coding downstream 106193 53853983 ~ 53854628 (-)
G19741 NA non-coding downstream 541744 53418185 ~ 53419077 (-)
G19957 NA non-coding upstream 82468 54054836 ~ 54055099 (-)
G19992 NA non-coding upstream 84517 54056885 ~ 54057927 (-)
G20066 NA non-coding upstream 397384 54369752 ~ 54370666 (-)
G20078 NA non-coding upstream 480253 54452621 ~ 54454276 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding upstream 522567 54494935 ~ 54498038 (-)
AMCG00017334 NA other downstream 3348 53953294 ~ 53957473 (-)
G19824 NA other downstream 196445 53762998 ~ 53764376 (-)
G19808 NA other downstream 231938 53676083 ~ 53728883 (-)
AMCG00017313 NA other downstream 429690 53452118 ~ 53531131 (-)
G19730 NA other downstream 573112 53383340 ~ 53387709 (-)
G19950 NA other upstream 60271 54032639 ~ 54034161 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other upstream 144896 54117264 ~ 54154094 (-)
AMCG00017343 NA other upstream 155319 54127687 ~ 54145216 (-)
G20064 NA other upstream 394416 54366784 ~ 54368016 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other upstream 555416 54527784 ~ 54535543 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004084 stimate coding NC_007122.7 CM002895.2 18270313 ~ 18283886 (-)