AMCG00017337


Basic Information

Item Value
gene id AMCG00017337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54058029 ~ 54062385 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017337
ACGAGAAGCGCAACTGCGGAGGCTGAGCCGAGCCAAGCCGGCCTGGGATCTGGGTTTGTCTGCACGGTGCATGGGAAGCGGCCGCGCTGGTGGAGCCGGAGCCGAGCAGAACCGCCGTGCCCGTCTGTCCATGCGTCCGTCCGTGATGTTGCACCCCGCTCTGCCTGGCCTCCTGTGTCTGGCCCTGTGCTCTCTGCTgccccctcaggctgtggcggTGACGGCACCCTGTGACACCTGCCGCCAGCTCACCAGCAGCTTCCTCCAGGGGCTGGAGCACACAGCCAATAAGAACTTTGGGGGTGGGAACACGGCCTGGGAGGAGGAGAAGCTGGCCAAGTATGCCTTGAGTGAGACCAGGCTGCTGGAGATCGTGGAGTCGGCGTGTGAGAGCTCAGACTTCCAGTGCAACCGGCTGCTGGAGCAGATCGAGGACCAGGTGGAGACATGGTGGTTCCACAggCAGCAGGAGGAGCCGGACCTGTTCGAGTGGCTCTGTATCGAGGAGCTGCGGCTGTGCTGCCCCCCCGGGACTTATGGCCCAGACTGCACAGcGTGCCTGGCGGGTGACGGGGGCGTGTGCGGGGGCCTGGGCCGTTGCCAGGGCGATGGCACGCGGGGGGGCAGCGGGGAGTGCGTGTGCGACCCGGGCTACGCAGGCACACTCTGCCAGGACTGCGCAGAGGGACACTACCGACACACTCCGGCCAACCAGAGCAGCTCCATCTGCGCAGCGTGTTTCCACTCGTGTAAGCGCTGCACGGGGCCAGAGAACTACAGGTGTACCGAGTGCAAGGCGGGCTGGAGTCTCCATGACAGCAAGTGTGTGGggTGTGACCGGGCGTGTGTGGGCTGCATGGGCGCTGGCCCAGCCCGCTGTAAGAAGTGTGCCAGGGGGTACAGGCAGAGCGGCGCCAAGTGCCTGGATGTGGATGAGTGCGCTGAGCGGGGGCTGGGGGCGTGTCCCGGTCTTAACGAGGCCTGTGTGAACGAGGACGGCTCGTTTCGCTGTGAATGTGCTGAGGGCTTCGTGCGCAAGGACACCATCTGCGTGGAGAACCTGCCGCCCTCGGGGCCGGAGCACGGGCTGTTCGAGGACATGACGGACGACGAGGTGCTGGTGCTGCAGCAGATGTTCTTCGGGGTGGTGATTTGCGCTCTGGCCACACTGGCCGCCAAGGGGGACATGGTCTTCACCGCCATCTTCATCGGTGCCGTGGCGGCCATGGCGGGCTACTGGATCAGCGAGAAGGGGGACCGTGTGCTGGACGGCTTCTTGCGGGGGCGCTAGAgagtgg

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K24335 CRELD; protein disulfide-isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017337 True 1298 mRNA 0.66 10 54058029 54062385

Neighbor

gene id symbol gene type direction distance location
AMCG00017339 NA coding downstream 49109 53996105 ~ 54008920 (-)
AMCG00017338 NA coding downstream 71320 53974133 ~ 53986709 (-)
AMCG00017332 tmem110,LOC108435844,LOC106582935,LOC107656046,LOC107755187,LOC103359875 coding downstream 85661 53960821 ~ 53972368 (-)
AMCG00017333 impdh2,LOC102785462 coding downstream 167381 53884651 ~ 53890648 (-)
AMCG00017327 NA coding downstream 193485 53857096 ~ 53864544 (-)
AMCG00017341 NA coding upstream 1984 54064369 ~ 54091597 (-)
AMCG00017345 NA coding upstream 33479 54095864 ~ 54097123 (-)
AMCG00017344 NA coding upstream 45318 54107703 ~ 54116284 (-)
AMCG00017342 ruvbl1,LOC107721190,LOC107667375,LOC107568195 coding upstream 84839 54147224 ~ 54151848 (-)
AMCG00017346 LOC106583208,LOC106565550 coding upstream 201705 54264090 ~ 54276339 (-)
G19992 NA non-coding downstream 102 54056885 ~ 54057927 (-)
G19957 NA non-coding downstream 2930 54054836 ~ 54055099 (-)
G19923 NA non-coding downstream 16996 53904295 ~ 54041033 (-)
G19918 NA non-coding downstream 143153 53894336 ~ 53914876 (-)
G19920 NA non-coding downstream 160577 53896824 ~ 53897452 (-)
G20066 NA non-coding upstream 307367 54369752 ~ 54370666 (-)
G20078 NA non-coding upstream 390236 54452621 ~ 54454276 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding upstream 432550 54494935 ~ 54498038 (-)
G20118 NA non-coding upstream 447851 54510236 ~ 54510488 (-)
G20122 NA non-coding upstream 516880 54579265 ~ 54579718 (-)
G19950 NA other downstream 23868 54032639 ~ 54034161 (-)
AMCG00017334 NA other downstream 100556 53953294 ~ 53957473 (-)
G19824 NA other downstream 293653 53762998 ~ 53764376 (-)
G19808 NA other downstream 329146 53676083 ~ 53728883 (-)
AMCG00017313 NA other downstream 526898 53452118 ~ 53531131 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other upstream 54879 54117264 ~ 54154094 (-)
AMCG00017343 NA other upstream 65302 54127687 ~ 54145216 (-)
G20064 NA other upstream 304399 54366784 ~ 54368016 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other upstream 465399 54527784 ~ 54535543 (-)
AMCG00017366 LOC105899076 other upstream 576038 54638423 ~ 54651864 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000050_00468156_00477480 CRELD1 coding CI01000050 null 467368 ~ 477480 (-)