AMCG00018322


Basic Information

Item Value
gene id AMCG00018322
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8119988 ~ 8122196 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018322
attcccagcatgcacttcGCGCAGAGCACCGTGCCAAAGGGCACTTTCACAGCAAGAACAAAACCGGCCTCGGCGGGCGATGCAGAGGCGCGGCTCCCGGCACGGATAACGGAGCGCTGTGTGCCTGCGCGATCAACGCCTTCGTGCATCGGGGCCCCGCTGCTTCAGACGCGGAGAGCAGAGTGCGCTGGGCGCGGTGTCCTGCCTGCCAGTGCGGCTGTCCCTCGGTCGCTCCAGGATGCTGTGCGCCGCCGCGGCGGAGAGGAACAAGGAGCCGATCCTCACAGTGCTGCGGGACTGCGTGGACCCCGGCCGGCAGCTCTCGGCGCTGGAGGTGTCGTCGGGCTCCGGGCAGCACGTCGTGCACTTCGCCCAGGCGCTGCCCAACGTCAGCTGGCAGCCGTCGGACATCGAGCAGACATCGCTGGACAGTATAGAGGCCTACAGAGCTCTGCTGAAGCTGCACAATGTGAAGCCGGCTATTCACCTGGACGCTTCCCAGGGCTGGGAGAGCTGGGGCGGCATCCAGCCCGAGTCCTTCCACCTGGTCATCAACATCAACATGATCCACATCTCCCCCCTGGCCTGCACCGAGGGTTTGTTCAAAGGAGCCGGTCGGATCCTGAAACCTCACGGATTGCTGCTGACATACGGGCCTTACTCTGTTAATGGACTCATAACCCCTCAAAGCAACATCGACTTCGACCAGAGTCTGAAAAGCAGGAACCCAGAGTGGGGAATCAAGGACACCTCCCTGTTGAGCGCCCTGGCAGAAGAGAACGGCATGTTTCTGGAGAGAGTGGTGGATATGCCCGCCAATAACAAGTGCCTGCTTTTTCGGAAGGAAAGCATGGTGTAAAGCCCTGGTCGAACCCGTGCCCGTTCCTGACTGTGGCGCCACCTAGAGCCAGGGGCACCGACTGAAATCTCTCTACCCGCCACCCTGGTCCATCAGCCCAAACTGGCACCCGATACAGGTCGCCCCGCAGCCGTGAAAGTGTGGCGCGAGCTGTCTGTCGCTGTGTACCATGAACCTCACTTACTGCACTGTCTCACATGTCCGGCCGCTTACTCACAGATCCTATCCTCAAAATGTAGCATTTACTCACTGACATAATTATAGACAACTGTACTGTGCCAATAAAGGGGTTTTACGATCTCGAAGGCTGCGTAGAAGTCTGGGAGGAGAATACAACGGAATAAAGTATGAAATCGTG

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03440 Homologous recombination
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018322 True 1217 mRNA 0.59 6 8119988 8122196

Neighbor

gene id symbol gene type direction distance location
AMCG00018316 NA coding downstream 38733 8079235 ~ 8081255 (-)
AMCG00018315 NA coding downstream 46041 8068201 ~ 8073947 (-)
AMCG00018314 NA coding downstream 74095 8040510 ~ 8045893 (-)
AMCG00018311 gsg1l,LOC107738642,LOC107690243,LOC107685933,LOC103366699 coding downstream 147119 7944117 ~ 7972869 (-)
AMCG00018310 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107568127,LOC107690242,LOC107733860 coding downstream 225419 7883207 ~ 7894569 (-)
AMCG00018323 NA coding upstream 1122 8123318 ~ 8140246 (-)
AMCG00018326 arl6ip1,LOC107658451 coding upstream 220934 8343130 ~ 8360156 (-)
AMCG00018330 smg1,LOC107729485,LOC107564004 coding upstream 241177 8363373 ~ 8391140 (-)
AMCG00018328 syt17,LOC107729446,LOC107658452,LOC107674134,LOC107564007,LOC107732856 coding upstream 287706 8409902 ~ 8422902 (-)
AMCG00018331 NA coding upstream 320999 8443195 ~ 8448944 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding downstream 251362 7860316 ~ 7868626 (-)
G115596 NA non-coding downstream 277280 7842337 ~ 7842708 (-)
G115580 NA non-coding downstream 377241 7742541 ~ 7742747 (-)
G115579 NA non-coding downstream 377778 7741974 ~ 7742210 (-)
G115577 NA non-coding downstream 385604 7734097 ~ 7734384 (-)
G115732 NA non-coding upstream 307930 8430126 ~ 8433570 (-)
G115807 NA non-coding upstream 395138 8517334 ~ 8519203 (-)
G115874 NA non-coding upstream 739677 8861873 ~ 8862377 (-)
G115949 NA non-coding upstream 1078604 9200800 ~ 9215817 (-)
G116058 NA non-coding upstream 1358714 9480910 ~ 9482152 (-)
G115581 NA other downstream 346096 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 1467215 6610633 ~ 6652773 (-)
G115320 NA other downstream 2168933 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 2753234 5356846 ~ 5366754 (-)
G115183 NA other downstream 2815559 5300107 ~ 5304429 (-)
AMCG00018344 NA other upstream 519700 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 544541 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 1117616 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 1652110 9774306 ~ 9779545 (-)
G116165 NA other upstream 1796850 9919046 ~ 9924582 (-)

Expression


Co-expression Network