AMCG00018331


Basic Information

Item Value
gene id AMCG00018331
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8443195 ~ 8448944 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018331
ATACTGTTAGCTTTGCTATGAATATATTGGGCCATGTGGCTTTCCTGCTTCTGCTGGGGGGGGTTGTTTCCCAGAACAACCGCAAACCCAACAGCAAGGCTACCAGGAAAACAGTGAGTCCAGCGGGGGAAGCAGCTCAACAGCCCCCCAATGATGAAGAATCAGCTCTCCAAGAGCACAGCAAGGAACAGGGGCTTCCCAATGCCAAGCCTCTCCAGAATCCAGCCCTTCACCTCCACAAGTCCAGCGATGACATGAAGCTTCATTTCCTGAAGAACACTCAGGTCACCTGCAACGATGGGACCAATGCAGGGTTTTACCTGAGGGAGAACAAGGGGAGCAAACGTTGGATGATATTTTTAGAAGGTGGTTGGTGCTGTTACAACAAAGAGACCTGCGATTCCAGATATAAAAATATCCCTCGTCTCATGAGCTCATTGGATTGGCCCCAGACACGCAAAgAAAGTGGAATCTTATCTGCTCAGGTTGAGGAAAACCCCCACTGGTGGAATGCCAACACAGTGTTGATTCCGTACTGCTCCAGTGATGTGTGGAGTGGAACATCTTCAAAGCCAGCAAAAGGAAAAGAGACAGCTGAATTTGCCTTCATGGGCTCCCTGATCGTCCGGGAGGTGATTAAAGAGCTGGTTGCGAAGGGGATCAAACAGGCCAAGGTGGTCATGTTGGCTGGAACAAGTGCTGGGGGGATGGGTGTGCTGCTGAACATCGACAAGGTGTCCAGTCTCCTGGAGCAGCTGGGGTCTGAGGCACAGGTGCGGGGACTGGTGGATTCTGGGTGGTTTCTGGAGAGCAAGCAGCCCAGGTCCCCGGAGTGCCCTGACAGCGCCTCCTGCACGCCCACCGATGCCATCAAGAAAGGCCTCCGGCTGTGGAGCAGTGCCATCCCTGATAAGTGCCGGCAGCAGTTCAAGAAGGGCGAAGAGTGGCAGTGCTTCTTTGGACACAAGCTCTACCCTTCCTTGAGCTCCCCTCTGTTCGTGGTGCAGTGGCTGTTTGACGAGGAGCAGCTGCGCATGGAGAACATCTACCAGGGTGGCCAGACTCTGTCCGAATACCAGTGGTCCTACATCCAGAACCTGGGCCGCGAGCTGAAGAACTCCCTACGAGATGTGACGGCGGTGTTTGCTCCCTCCTGCCTGTCCCACACGTTGATCACTAAGAGTAACTGGATGGATTTCCAAATCAAGGGGACCTCTGTCTCCCGGGCCCTGCAGTGCTGGGACAAGAGCCTCCAGGAAGCTAACAAGAACAGCAAAACACCCCTCAAAGGCTGCCCCTTTCATCTCATCGACAACTGCCAGTGGCCCCAGTGCAACCCCACGTGCCCAGCTCTGGTGGACAAGGCCACGAACCAGAAGATCAGCCTGCTGCAACTCCTTGTAGGCTTAGGCCTGGACCTGCAGAAGATCAGCCAAGACCTGAAGGGAGAGGCCAGCCACCTGACAGGC

Function

GO: NA

KEGG:

id description
K19882 NOTUM; O-palmitoleoyl-L-serine hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018331 True 1469 mRNA 0.55 11 8443195 8448944

Neighbor

gene id symbol gene type direction distance location
AMCG00018328 syt17,LOC107729446,LOC107658452,LOC107674134,LOC107564007,LOC107732856 coding downstream 20293 8409902 ~ 8422902 (-)
AMCG00018330 smg1,LOC107729485,LOC107564004 coding downstream 52055 8363373 ~ 8391140 (-)
AMCG00018326 arl6ip1,LOC107658451 coding downstream 83039 8343130 ~ 8360156 (-)
AMCG00018323 NA coding downstream 302949 8123318 ~ 8140246 (-)
AMCG00018322 NA coding downstream 320999 8119988 ~ 8122196 (-)
AMCG00018329 coq7,LOC106564609 coding upstream 14375 8463319 ~ 8469629 (-)
AMCG00018334 NA coding upstream 70659 8519603 ~ 8541039 (-)
AMCG00018343 NA coding upstream 148149 8597093 ~ 8602734 (-)
AMCG00018341 clg6h16orf45,LOC101485480,LOC102775719,LOC108236367,LOC103355942 coding upstream 176933 8625877 ~ 8631588 (-)
AMCG00018342 NA coding upstream 228920 8677864 ~ 8684648 (-)
G115732 NA non-coding downstream 9625 8430126 ~ 8433570 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding downstream 574569 7860316 ~ 7868626 (-)
G115596 NA non-coding downstream 600487 7842337 ~ 7842708 (-)
G115580 NA non-coding downstream 700448 7742541 ~ 7742747 (-)
G115579 NA non-coding downstream 700985 7741974 ~ 7742210 (-)
G115807 NA non-coding upstream 68390 8517334 ~ 8519203 (-)
G115874 NA non-coding upstream 412929 8861873 ~ 8862377 (-)
G115949 NA non-coding upstream 751856 9200800 ~ 9215817 (-)
G116058 NA non-coding upstream 1031966 9480910 ~ 9482152 (-)
G116065 NA non-coding upstream 1078548 9527492 ~ 9527736 (-)
G115581 NA other downstream 669303 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 1790422 6610633 ~ 6652773 (-)
G115320 NA other downstream 2492140 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 3076441 5356846 ~ 5366754 (-)
G115183 NA other downstream 3138766 5300107 ~ 5304429 (-)
AMCG00018344 NA other upstream 192952 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 217793 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 790868 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 1325362 9774306 ~ 9779545 (-)
G116165 NA other upstream 1470102 9919046 ~ 9924582 (-)

Expression


Co-expression Network