AMCG00018473


Basic Information

Item Value
gene id AMCG00018473
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 11926937 ~ 11944889 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018473
ATGGTCTCTGCCGCAGTGCAGCGCAGCAGCCTAATTGGCCAGAGCCCCACTGAGTTCCTGTTGCCGGGGCGAGAGGAGGTGCAGCGCAGCCGTGTGGTGCTTACCTCCCTGCGACAGGCCAAGCACCTCACTCCACTGCAGCTGGGCACAGGTTATTTCACGCACATCCTGGTGGACGAAGCTGGGTGCTCTCCAGAGTGCGAGACCCTGTTGGCCCTGTGCCTAGCTGACCGCTCTACTCGTATTGTGCTCGCGGGGGACCCTGCACAGCTCCCCCCACTGGTGCACAGTGAGTTTGCCCGGGAGCGTGGCCTGCAGCGTCCCCTGCTGGAGAGGCTGTGCGCTCTGTACCCTGAGCCCTGCTGCTGCCGGCTGGAGCTGAATGAGCAGTACCGCACCCAACAGCACATCGTCAGCCTGGTCTCTGAGCTGTTCTATGGTGGCGAGCTGCGGGCTGCCAGTAAACAGCCAGCTCACAAAGACTTCTTCCCAGTGTCGTTCTTCGTGGCGTGGGGGGCGGAAAAGAGCTGCTGCGGCTATTACAACTACGCCGAGGTGCTGGAGGTGGTGGAGCAGGTGGAGAGCCTATGTAAGCGCTGGCCCGTGTCTTGGGGGAAGTTGGAGGAGGGCAGCCTGGGCCGTTATTTCCGGGTGCTGTTTGTGAGCGTGGTGAGGACGAGGCACACCTACAAGGAGCCGGTCCCTGGGGTGGGGGGTCGACGCAGAGAGCTCCCCCAGGAGGAGGATAGCGTGGAGGACCGGGAGCTGGGTTTCCTGTCCAGTCCCCGGATGCTGCGCTCTGTGATGCTGCGTGCCCAGTCCCTGTTGGCTGTGGTGGGAGACCCCGTAGCCCTCTGCACCATGGGAAAATGCCGGAGGGTGTGGGAGCGATACCTGGCTCTGTGCCACAAGAGGGACAGCCTCCATGGGGCCACGCTGCCCGAGATCCTGGCACAGATCGACAGCCTGGAGACCAGCCGTAGCTGTATGCTCAACCCCTTGGCCCCCGAGTTTGTGCCCCTCTCCCGCCGCCTGCCCGCCCCGCTGCCCTGCCTCACGGCTAATCCCATTCCAAATCGATTGGACGGCTACTTGAAAAGGGGTTTTTCCAAGAAGCGGAATAAAAAGATCCAGTTTCAGCGCTTCAAACACCCGGCACAGAGAGACCTCTATGGACACGCATTTCCCCTCGGGGGGCCGCCTTGCCCCCTGCCTCTCCCCGTGGGTCGCCATTCTGTGTACGGGAGGTCCCCCAGCCCCCTGCCACGCCCAGACCCCTCGACCAGGAGCAACCTGCTGTGCGGCTCCCCCTACCGCAGCCGCCTGCTCATGCCTCTCCCTATGTCTGTGAGTAATAGCAAGAGTGCCCCTTCACTTGGACGCCCACAACCTGCTGTCTGGATCCACAGCAGCCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018473 True 1419 mRNA 0.63 10 11926937 11944889

Neighbor

gene id symbol gene type direction distance location
AMCG00018466 NA coding downstream 365114 11542796 ~ 11561823 (-)
AMCG00018458 NA coding downstream 484859 11437510 ~ 11442078 (-)
AMCG00018457 pgp coding downstream 501449 11417434 ~ 11425488 (-)
AMCG00018459 NA coding downstream 509840 11411990 ~ 11417097 (-)
AMCG00018461 NA coding downstream 526370 11395104 ~ 11400567 (-)
AMCG00018472 NA coding upstream 410 11945299 ~ 11958566 (-)
AMCG00018474 NA coding upstream 15695 11960584 ~ 11967995 (-)
AMCG00018480 NA coding upstream 177984 12122873 ~ 12135103 (-)
AMCG00018479 NA coding upstream 193884 12138773 ~ 12147324 (-)
AMCG00018486 NA coding upstream 258311 12203200 ~ 12222768 (-)
G116529 NA non-coding downstream 317367 11608137 ~ 11609570 (-)
G116511 NA non-coding downstream 394867 11531798 ~ 11532070 (-)
G116501 NA non-coding downstream 412444 11511463 ~ 11514493 (-)
G116454 NA non-coding downstream 573840 11280366 ~ 11353097 (-)
G116446 NA non-coding downstream 673372 11252359 ~ 11253565 (-)
G116610 NA non-coding upstream 148580 12093469 ~ 12118810 (-)
G116619 NA non-coding upstream 174919 12119808 ~ 12120607 (-)
G116672 NA non-coding upstream 350572 12295461 ~ 12298711 (-)
G116749 NA non-coding upstream 930026 12874915 ~ 12876763 (-)
G116750 NA non-coding upstream 934776 12879665 ~ 12884422 (-)
G116577 NA other downstream 15601 11911014 ~ 11911336 (-)
G116428 NA other downstream 724049 11199578 ~ 11202888 (-)
AMCG00018440 NA other downstream 779997 11088174 ~ 11146940 (-)
AMCG00018437 srebf1,LOC107713935 other downstream 843157 11061628 ~ 11083780 (-)
AMCG00018431 trrap other downstream 1346832 10562554 ~ 10580105 (-)
AMCG00018490 NA other upstream 342679 12287568 ~ 12290544 (-)
AMCG00018522 NA other upstream 1308196 13253085 ~ 13257250 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other upstream 1700479 13645368 ~ 13727870 (-)
AMCG00018555 LOC107689851 other upstream 2297656 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 2558514 14503403 ~ 14520875 (-)

Expression


Co-expression Network