G116672


Basic Information

Item Value
gene id G116672
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 12295461 ~ 12298711 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146143
aataaaaacaattcaatttttaatacttgtgattaaaaacattgacatattaatccttaaaatcacttaaaatttttaaaatctttgtgatttttaacaaaactaaaacaataaactttaaaataaacgtgctcaaatcaaataaacaaaacgtgataaaagcaaaaaaattgcacaccaacaaaagagtcaaatacattgaaaataacagaaaatgcattaaacaaattaaaaaaacaattaaaaagtaaaaataaaaaacaaacaaaaaagtctaatgcattttaaattaaacccaaaacggtcaatgtatttgacaaaaaaatataacaaaactctACCAAAAACCCTAAAcagtgtgatttaaaaacaactaaatctttaaaaacaattaagattcattatttaaaatcttcttttaaaaacaatcattcttaaaatctttaaaagatcTTTAAAAGATCAGgtgcaatgaaaaacaaaactgagtaagTGTGGGGCAGTGACAAGGGGTGTGGGGCAGTGACAAGGGGTGGGTGGCGAGGGGGGTGCGCTTACCATACTGTCGTCCTCATCGCGGGGGGAGTAGGTCATggtgctggaggaggagggggtccGGCGATGCTGCTTGTAATTACCGGTTCCTTCAGCTAAGATGGGAGAGCCTTTAGTGATAGTGGTAACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146143 True 686 lncRNA 0.32 2 12295461 12298711

Neighbor

gene id symbol gene type direction distance location
AMCG00018485 NA coding downstream 21999 12271996 ~ 12273462 (-)
AMCG00018484 LOC103399497 coding downstream 60560 12223651 ~ 12234901 (-)
AMCG00018486 NA coding downstream 72693 12203200 ~ 12222768 (-)
AMCG00018479 NA coding downstream 148137 12138773 ~ 12147324 (-)
AMCG00018480 NA coding downstream 160358 12122873 ~ 12135103 (-)
AMCG00018488 caskin1,LOC107721515 coding upstream 20695 12319406 ~ 12350065 (-)
AMCG00018489 LOC105030342,LOC107721515,LOC107654476 coding upstream 64585 12363296 ~ 12371524 (-)
AMCG00018494 NA coding upstream 220618 12519329 ~ 12530668 (-)
AMCG00018495 NA coding upstream 246229 12544940 ~ 12553398 (-)
AMCG00018496 NA coding upstream 272177 12570888 ~ 12574512 (-)
G116619 NA non-coding downstream 174854 12119808 ~ 12120607 (-)
G116610 NA non-coding downstream 176651 12093469 ~ 12118810 (-)
G116529 NA non-coding downstream 685891 11608137 ~ 11609570 (-)
G116511 NA non-coding downstream 763391 11531798 ~ 11532070 (-)
G116501 NA non-coding downstream 780968 11511463 ~ 11514493 (-)
G116749 NA non-coding upstream 576204 12874915 ~ 12876763 (-)
G116750 NA non-coding upstream 580954 12879665 ~ 12884422 (-)
G116784 NA non-coding upstream 690725 12989436 ~ 13046593 (-)
G116875 slc29a4,LOC108430547,LOC107104199 non-coding upstream 1032180 13330891 ~ 13342748 (-)
G116883 NA non-coding upstream 1067863 13366574 ~ 13367055 (-)
AMCG00018490 NA other downstream 4917 12287568 ~ 12290544 (-)
G116577 NA other downstream 384125 11911014 ~ 11911336 (-)
G116428 NA other downstream 1092573 11199578 ~ 11202888 (-)
AMCG00018440 NA other downstream 1148521 11088174 ~ 11146940 (-)
AMCG00018437 srebf1,LOC107713935 other downstream 1211681 11061628 ~ 11083780 (-)
AMCG00018522 NA other upstream 954374 13253085 ~ 13257250 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other upstream 1346657 13645368 ~ 13727870 (-)
AMCG00018555 LOC107689851 other upstream 1943834 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 2204692 14503403 ~ 14520875 (-)
G117377 NA other upstream 2437427 14736138 ~ 14738312 (-)

Expression


Co-expression Network