G63448


Basic Information

Item Value
gene id G63448
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 21084117 ~ 21084538 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79397
ctaaagaagacctctcccccccaaagttatcagatttccttagttcatcagcttggaactggtttgcatcagagtgacagttttggggaggatggcaccgagaatgggccgaATGGTTTGGagtcctgctgtgaaatgtctggagaaaggggcctgtaggtgataaaaactctttgaagtggacgagagccgaaatcccgacatagagctacgaacccgggccaaccggcatttccaaaagatggcatggattgacatcagtcataaatcaagcccccctccaataggacaccgggggctgaaaccgaaatccaatctcaagaactcaaacaccaatcacctattgatctgacagactataaggaacagcgcacagtctctctctttctctctctctcacctgaaccagtaactcgctgcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79397 True 422 lncRNA 0.49 1 21084117 21084538

Neighbor

gene id symbol gene type direction distance location
AMCG00020461 NA coding upstream 411927 20661673 ~ 20672190 (+)
AMCG00020460 NA coding upstream 425865 20634866 ~ 20658252 (+)
AMCG00020459 phkb coding upstream 557895 20501491 ~ 20526222 (+)
AMCG00020458 phkb,LOC107591034,LOC107723134,LOC107757780,LOC107598686 coding upstream 594120 20467388 ~ 20489997 (+)
AMCG00020444 NA coding upstream 773428 20300013 ~ 20310689 (+)
AMCG00020468 NA coding downstream 946587 22031125 ~ 22047368 (+)
AMCG00020469 LOC106587286,LOC106561986,LOC107704827,LOC107681497 coding downstream 1009780 22094318 ~ 22097040 (+)
AMCG00020467 NA coding downstream 1033315 22117853 ~ 22121079 (+)
AMCG00020473 NA coding downstream 1106049 22190587 ~ 22197292 (+)
AMCG00020474 ca7,LOC106561977 coding downstream 1141363 22225901 ~ 22241448 (+)
G63433 NA non-coding upstream 503684 20563817 ~ 20580433 (+)
G63360 NA non-coding upstream 770845 20311699 ~ 20313272 (+)
G63334 vps35,LOC107659455,LOC107598694 non-coding upstream 832160 20248832 ~ 20251957 (+)
G63328 NA non-coding upstream 843191 20238830 ~ 20240926 (+)
G63318 NA non-coding upstream 886690 20197177 ~ 20197427 (+)
G63477 NA non-coding downstream 554458 21638996 ~ 21639656 (+)
G63562 NA non-coding downstream 1123170 22207708 ~ 22208031 (+)
G63564 NA non-coding downstream 1267635 22352173 ~ 22382491 (+)
G63589 fam96b,LOC106562058 non-coding downstream 1269480 22354018 ~ 22354979 (+)
G63592 NA non-coding downstream 1298979 22383517 ~ 22391241 (+)
AMCG00020438 NA other upstream 1447896 19631325 ~ 19636221 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other upstream 1481793 19597203 ~ 19602324 (+)
G63045 NA other upstream 2750085 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 3012066 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 3018328 18058558 ~ 18065789 (+)
AMCG00020470 NA other downstream 1050830 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 1271636 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 1969260 23053798 ~ 23062149 (+)
G63786 znf821,LOC107747380 other downstream 1985873 23070411 ~ 23074945 (+)
AMCG00020529 LOC107090538 other downstream 2948499 24033037 ~ 24068457 (+)

Expression


Co-expression Network