G63564


Basic Information

Item Value
gene id G63564
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 22352173 ~ 22382491 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79532
TAATGAGATGTACCAGCAAACTATGAGTGAAGTAAACAAGGACACAATCATTTAGTACAGACATTTTATTAgatgtttcagttaatttcaaccCTTTATCATAGCctactttcttttaaaacaccagtttcaaaaaaagttcaaagtttcaattaagaaatacatgattttagttttgtatgaaTTGTAACAGAAGTAGCTTACTTTAGCTCAGATATTGTCAGTTCATACAGAACCTGTTAGAggctggaaaaaaacaacaaccttgtTCTTCATTTTCTCAATAGAAAGGTTATGATGAGGCGtgtccattcatttttttttgttgtctttcagTAAATCCAGTCCAGGAATGTTTCCCTTCACACAGGGCCATATTTGGTTTGACCTCATgttttttgcaaacattttttacaatttcTTTAAATGGCATTAATGTGTGAACTGGATTATAGTGATGATGATTTGCAGAGTAAGCCTCACACTCTCATTCTCCTTCATCTGGCCCCAACATGATGACACTTAAGAATAGTATTAATAGTGCAAAAtaacatgttttttttatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79532 True 577 lncRNA 0.32 2 22352173 22382491

Neighbor

gene id symbol gene type direction distance location
AMCG00020480 NA coding upstream 1767 22346354 ~ 22350406 (+)
AMCG00020481 NA coding upstream 5844 22334724 ~ 22346329 (+)
AMCG00020479 NA coding upstream 99922 22250662 ~ 22252251 (+)
AMCG00020474 ca7,LOC106561977 coding upstream 110725 22225901 ~ 22241448 (+)
AMCG00020473 NA coding upstream 154881 22190587 ~ 22197292 (+)
AMCG00020484 NA coding downstream 27691 22410182 ~ 22425882 (+)
AMCG00020486 snai3,LOC106587174,LOC107667233,LOC107599746 coding downstream 48045 22430536 ~ 22431810 (+)
AMCG00020485 NA coding downstream 85032 22467523 ~ 22473932 (+)
AMCG00020490 NA coding downstream 161309 22543800 ~ 22554214 (+)
AMCG00020491 trappc2l,LOC107600366,LOC107730159 coding downstream 197606 22580097 ~ 22582459 (+)
G63562 NA non-coding upstream 144142 22207708 ~ 22208031 (+)
G63477 NA non-coding upstream 712517 21638996 ~ 21639656 (+)
G63448 NA non-coding upstream 1267635 21084117 ~ 21084538 (+)
G63433 NA non-coding upstream 1771740 20563817 ~ 20580433 (+)
G63360 NA non-coding upstream 2038901 20311699 ~ 20313272 (+)
G63592 NA non-coding downstream 1026 22383517 ~ 22391241 (+)
G63772 NA non-coding downstream 591387 22973878 ~ 22974091 (+)
G63784 NA non-coding downstream 685820 23068311 ~ 23070149 (+)
G63787 NA non-coding downstream 694410 23076901 ~ 23077313 (+)
G63789 NA non-coding downstream 703887 23086378 ~ 23086933 (+)
AMCG00020470 NA other upstream 209975 22135368 ~ 22142198 (+)
AMCG00020438 NA other upstream 2715952 19631325 ~ 19636221 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other upstream 2749849 19597203 ~ 19602324 (+)
G63045 NA other upstream 4018141 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 4280122 18067787 ~ 18072051 (+)
AMCG00020505 NA other downstream 671307 23053798 ~ 23062149 (+)
G63786 znf821,LOC107747380 other downstream 687920 23070411 ~ 23074945 (+)
AMCG00020529 LOC107090538 other downstream 1650546 24033037 ~ 24068457 (+)
G63939 NA other downstream 1669498 24051989 ~ 24055592 (+)
G64046 NA other downstream 2096344 24478835 ~ 24482114 (+)

Expression


Co-expression Network