AMCG00020481


Basic Information

Item Value
gene id AMCG00020481
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 22334724 ~ 22346329 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020481
ATGCCGGCGCTATCTCCGGCGGAGCTCCAGAGGCCGTCCTGTGTACCCTTCCGCTCTCCGTCTCCCGTTGTCGCTTCTGTAATGTCGTCGCGCCACTCTTGGTCACCGATTTTCTCTTCCTCCGCTGAGCTGCCGCTGGCGGGGCCTCACTGTTCTCCCAGCTGGGCTTCCTCAGCGGAGATCTGTATCTGGGCCGCACACGCCAGCTCTATTTCCTGTGAAGCTCCGGAGACCATCTTGTTTACACTCTCGGCAAGCCTCGATGCCGTCATCGCGCCGTTCTTGGTTGCCGATGTCCCCTTCCTCTGCAGGACCCGTTGGCTCTGTGGAGGCCTCCTCCGGCGGAGCCTCGCTGTTGTAGTTCCATCGCTGCGGGATCTCTTCATTTTCACTCTGTCACATTTCGTCAGCTCCTTCAGCTTCTCCTTGTTGCTCCAGCAACTTGCTCTCTGTTCCTGGTCCTTCTTGACGTTCTCCCAGCTGGATTCAACTGCCTCCCGCGGTTGCTGGGCACTGCTCGCCGGTGCAGCAGCTGCCTGCCTTGGGCACTCTTCACCGCCGTTCCGCGGTCCCCGGAGCCCAGTCTCTGGCTCTTCACACCGGTCCGCAGTCCCTGGAGCCCCGTCTCTGGCTCTTCATCTTCCTCCAGCTGGGGCTCGTCGCTGGCGCCCCTTTCAAATTGCACCCGGATTAAACTTGCAGTCAGCTGTGCTCGCCATGGGGAAGGCCAATCAAACGGCTCTCCAGAGCTTCTCAAGGAACTCCATATCGGACTGTATGGGCAACTGGACCATCCTGCTTGACCACAGCCTGAACCACCACAGTTCATCCTCAGAGCTCTCCCCCTGGTCGGGTTTCCGCTGGCTCTCTCTCTTTGCTGCGTGTGCTTCCTGTCCCAGTAATATGGAAGTTGTGAATGGTAAAGGCTGGACCCCCATCCATCAtgctgcatttcaaaataacagcAAGTTGGTGGAAGAGTTTGTCCAGAGCTCTAGACTGCACCTACTGGAAATGACATCAGACCACAAAAACTCTGATGGGCCTGGGAGTGGATATGGCTGCAATACCCAGTATCATGGGGTGGTGGAGGCTGGTGCCCTGGGGGAACATGTGGATCTCTTGGAGTACTTCACCAGTCTGCAGCACCCCAAGCTGGAGGTTTATCAGAGGCTGGTCAAGTTCCTCATCTCATACTGTGCAGAGGAAGCTGTGAAAGCAGGTAGAATTGCCCAAGAAGGCAAGTATGCCGAGGCCCTTTCCTCTGCTGGCCTGCTTCTTGTTCTGCTGAGAGTGATACAGAAGGCCAGAGTGCATGGCAGTGAAGGGACCGAGGAGACCATTGTGATCCCAGCTCTCAACTGTCTGTCCTCTGCAGCCTCAGGCAGCAAGGTTTTTCGGGACAGCATGGGGAAGATGCCACTGACAGAGGGCAATGAGCATGCTCAGAAATGTGTTCTGGAGGGTGGAGGGCTGATGGCACTCATGCACCTCCTAAAGAAGACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020481 True 1509 mRNA 0.57 6 22334724 22346329

Neighbor

gene id symbol gene type direction distance location
AMCG00020479 NA coding upstream 82473 22250662 ~ 22252251 (+)
AMCG00020474 ca7,LOC106561977 coding upstream 93276 22225901 ~ 22241448 (+)
AMCG00020473 NA coding upstream 137432 22190587 ~ 22197292 (+)
AMCG00020467 NA coding upstream 213645 22117853 ~ 22121079 (+)
AMCG00020469 LOC106587286,LOC106561986,LOC107704827,LOC107681497 coding upstream 237684 22094318 ~ 22097040 (+)
AMCG00020480 NA coding downstream 25 22346354 ~ 22350406 (+)
AMCG00020484 NA coding downstream 63853 22410182 ~ 22425882 (+)
AMCG00020486 snai3,LOC106587174,LOC107667233,LOC107599746 coding downstream 84207 22430536 ~ 22431810 (+)
AMCG00020485 NA coding downstream 121194 22467523 ~ 22473932 (+)
AMCG00020490 NA coding downstream 197471 22543800 ~ 22554214 (+)
G63562 NA non-coding upstream 126693 22207708 ~ 22208031 (+)
G63477 NA non-coding upstream 695068 21638996 ~ 21639656 (+)
G63448 NA non-coding upstream 1250186 21084117 ~ 21084538 (+)
G63433 NA non-coding upstream 1754291 20563817 ~ 20580433 (+)
G63360 NA non-coding upstream 2021452 20311699 ~ 20313272 (+)
G63564 NA non-coding downstream 5844 22352173 ~ 22382491 (+)
G63589 fam96b,LOC106562058 non-coding downstream 7689 22354018 ~ 22354979 (+)
G63592 NA non-coding downstream 37188 22383517 ~ 22391241 (+)
G63772 NA non-coding downstream 627549 22973878 ~ 22974091 (+)
G63784 NA non-coding downstream 721982 23068311 ~ 23070149 (+)
AMCG00020470 NA other upstream 192526 22135368 ~ 22142198 (+)
AMCG00020438 NA other upstream 2698503 19631325 ~ 19636221 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other upstream 2732400 19597203 ~ 19602324 (+)
G63045 NA other upstream 4000692 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 4262673 18067787 ~ 18072051 (+)
AMCG00020487 NA other downstream 9845 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 707469 23053798 ~ 23062149 (+)
G63786 znf821,LOC107747380 other downstream 724082 23070411 ~ 23074945 (+)
AMCG00020529 LOC107090538 other downstream 1686708 24033037 ~ 24068457 (+)
G63939 NA other downstream 1705660 24051989 ~ 24055592 (+)

Expression


Co-expression Network