G63589 (fam96b,LOC106562058)


Basic Information

Item Value
gene id G63589
gene name fam96b,LOC106562058
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 22354018 ~ 22354979 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79565
GACGATTATACACTTGGGAAATGACTAAATAACCCTGGGCAGAGATGATTTTATTATCATCAGGGGGCTTTGGAGATTTGATGTCCAAGccaatgtgaaatgaaaatcagcGCAACTCACATGGACCCTCACTTGTTCCACGACATTTAACTCCTCCAGGGACAGCGGGTGCTCGGGGTCATTAATGGATCTGATCAGATCGAAAATTTCTCTGTCGTCGATAGGATCCGCAAAGTCTTCGTCTTCATCCTCCGCCGTTAGTAATCTTTCCCCTGACCGCTGATAGATAAGAGGGTTTGCATTTTCTAATCGCGTCTCTACAGACATCTTgtaattttgtataatttgcTAGAGAAACGAATAATACTTTGTTAGCAAACATGCGAAGTCCTTTCTTCCGTTCTGCGTCTTTGGGTCGCTGAGCTACGGCACCTCCAAAGGGTCAAACAGCCCCGAGATACGCTCGGTTATCGATGTTTGGAAGGAAATGTCAGTATGAACTTAAAATATGTGCGGTGATGAACGGTTTATGTGATGGCCGTCTCAAAACCGAGATACTTTCATAACCTACCTGCAGgctgaaataattgtattttaaaacaagcgTAATCGTTTTGGAATGCGATTTAAACTCCTTTTTACTTACTTTTTACTAGGTTTACTAAGCTAAACCTGTTCAGTgaagttatttatgtatttcaatgtttcgttgttggtttgtttttcttatcgAACCACAACAGTATGTTGTCAGTCTGTGTTCCTGGGTCAGTGTACTGC

Function

NR:

description
PREDICTED: mitotic spindle-associated MMXD complex subunit MIP18

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79565 True 780 lncRNA 0.42 2 22354018 22354979

Neighbor

gene id symbol gene type direction distance location
AMCG00020480 NA coding upstream 3612 22346354 ~ 22350406 (+)
AMCG00020481 NA coding upstream 7689 22334724 ~ 22346329 (+)
AMCG00020479 NA coding upstream 101767 22250662 ~ 22252251 (+)
AMCG00020474 ca7,LOC106561977 coding upstream 112570 22225901 ~ 22241448 (+)
AMCG00020473 NA coding upstream 156726 22190587 ~ 22197292 (+)
AMCG00020484 NA coding downstream 55203 22410182 ~ 22425882 (+)
AMCG00020486 snai3,LOC106587174,LOC107667233,LOC107599746 coding downstream 75557 22430536 ~ 22431810 (+)
AMCG00020485 NA coding downstream 112544 22467523 ~ 22473932 (+)
AMCG00020490 NA coding downstream 188821 22543800 ~ 22554214 (+)
AMCG00020491 trappc2l,LOC107600366,LOC107730159 coding downstream 225118 22580097 ~ 22582459 (+)
G63562 NA non-coding upstream 145987 22207708 ~ 22208031 (+)
G63477 NA non-coding upstream 714362 21638996 ~ 21639656 (+)
G63448 NA non-coding upstream 1269480 21084117 ~ 21084538 (+)
G63433 NA non-coding upstream 1773585 20563817 ~ 20580433 (+)
G63360 NA non-coding upstream 2040746 20311699 ~ 20313272 (+)
G63592 NA non-coding downstream 28538 22383517 ~ 22391241 (+)
G63772 NA non-coding downstream 618899 22973878 ~ 22974091 (+)
G63784 NA non-coding downstream 713332 23068311 ~ 23070149 (+)
G63787 NA non-coding downstream 721922 23076901 ~ 23077313 (+)
G63789 NA non-coding downstream 731399 23086378 ~ 23086933 (+)
AMCG00020470 NA other upstream 211820 22135368 ~ 22142198 (+)
AMCG00020438 NA other upstream 2717797 19631325 ~ 19636221 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other upstream 2751694 19597203 ~ 19602324 (+)
G63045 NA other upstream 4019986 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 4281967 18067787 ~ 18072051 (+)
AMCG00020487 NA other downstream 1195 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 698819 23053798 ~ 23062149 (+)
G63786 znf821,LOC107747380 other downstream 715432 23070411 ~ 23074945 (+)
AMCG00020529 LOC107090538 other downstream 1678058 24033037 ~ 24068457 (+)
G63939 NA other downstream 1697010 24051989 ~ 24055592 (+)

Expression


Co-expression Network