Gene
RNA
| Item | Value |
|---|---|
| gene id | G83878 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 6578854 ~ 6580419 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006091 | generation of precursor metabolites and energy | biological_process |
| GO:0005975 | carbohydrate metabolic process | biological_process |
| id | description |
|---|---|
| ko00010 | Glycolysis / Gluconeogenesis |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU104642 | True | 1312 | lncRNA | 0.45 | 2 | 6578854 | 6580419 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021135 | NA | coding | downstream | 36552 | 6538542 ~ 6542302 (-) |
| AMCG00021136 | NA | coding | downstream | 128682 | 6449423 ~ 6450172 (-) |
| AMCG00021134 | LOC100697681,LOC101472898,LOC102787112,LOC102308013,LOC102213142 | coding | downstream | 157116 | 6397628 ~ 6421738 (-) |
| AMCG00021125 | fam199x,LOC100194523 | coding | downstream | 1841640 | 4728373 ~ 4737214 (-) |
| AMCG00021122 | LOC106604955,LOC106611984 | coding | downstream | 2113196 | 4463840 ~ 4465658 (-) |
| AMCG00021141 | tmm47,LOC105912477,LOC105030438,LOC106603112,LOC107662487,LOC103353305,LOC101483903 | coding | upstream | 79118 | 6659537 ~ 6670212 (-) |
| AMCG00021145 | pak3,LOC106563430 | coding | upstream | 235516 | 6815935 ~ 6844522 (-) |
| AMCG00021154 | LOC106563513 | coding | upstream | 472117 | 7052536 ~ 7063256 (-) |
| AMCG00021152 | tmem164,LOC102783906 | coding | upstream | 498759 | 7079178 ~ 7079639 (-) |
| AMCG00021155 | NA | coding | upstream | 507582 | 7088001 ~ 7101704 (-) |
| G83860 | pgrmc1 | non-coding | downstream | 47581 | 6530936 ~ 6531273 (-) |
| G83839 | NA | non-coding | downstream | 314283 | 6264336 ~ 6264571 (-) |
| G83833 | NA | non-coding | downstream | 603073 | 5975474 ~ 5975781 (-) |
| G83773 | NA | non-coding | downstream | 1719625 | 4822058 ~ 4859229 (-) |
| G83764 | NA | non-coding | downstream | 1838970 | 4739096 ~ 4739884 (-) |
| G83901 | NA | non-coding | upstream | 62803 | 6643222 ~ 6643523 (-) |
| G83931 | NA | non-coding | upstream | 231813 | 6812232 ~ 6813434 (-) |
| G84052 | gabrb4,LOC108429394,LOC103032374,LOC107727281,LOC107571379 | non-coding | upstream | 810203 | 7390622 ~ 7390915 (-) |
| G84053 | NA | non-coding | upstream | 810645 | 7391064 ~ 7392433 (-) |
| G84081 | NA | non-coding | upstream | 882309 | 7462728 ~ 7469428 (-) |
| G83864 | NA | other | downstream | 32277 | 6544492 ~ 6546577 (-) |
| G83761 | NA | other | downstream | 1827619 | 4703255 ~ 4751235 (-) |
| AMCG00021090 | NA | other | downstream | 3859935 | 2677585 ~ 2718919 (-) |
| G83428 | NA | other | downstream | 4119475 | 2457001 ~ 2459379 (-) |
| G83313 | NA | other | downstream | 4600886 | 1973160 ~ 1977968 (-) |
| AMCG00021153 | NA | other | upstream | 535001 | 7115420 ~ 7122491 (-) |
| AMCG00021249 | NA | other | upstream | 5513058 | 12093477 ~ 12100854 (-) |
| G84814 | NA | other | upstream | 5946674 | 12527093 ~ 12527694 (-) |
| AMCG00021259 | diaph2 | other | upstream | 6139445 | 12719864 ~ 12801586 (-) |
| G84952 | NA | other | upstream | 7046916 | 13627335 ~ 13627747 (-) |
