G84053


Basic Information

Item Value
gene id G84053
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 7391064 ~ 7392433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104860
ttaatgactgtaGGCCATCTGAGGTCACTTTAGGTCATGGTTTTATCAAATGTCTTTTTAACCCCTTGAAACCCCAACCATTACCAGACTATAATCCTGCTGTTTGCAAAGGCAATGTATCCTATAAAAAGATATTGCAGTCTGTGATAGAATTTCAATGTGCATTCTGGAGGCTGGTAGTTGGGATTTAACTACTTATTCCACTGGTTAAAAGATCAGTTAACAAAAACTCCATGAATACTTGGACAGGCACGGCTAGCGAgaaccaaaatattaataacatttccagggtgtaaaacaaaatatgacaaaGGAGCAAAGCATACAATATAACTCACACTATGTAGATATGTATAATCGCATGTTAAACAGAAAAAGAGATAGTGATATTcccttttgtttaatttacagttgCTGATTTTccccttattttattaatcaaaatttgGTAAATGGAATAACTTCTTATTCAAGCTGTGAAAAAACAACGGCCCACCTGGTATTTTCTCTCTAACtacacaaacatattaaaaaacaaaaatggatatAAAGATTCACAGAACAGGTGCAGCACTAAGaaacagttaatgaaaataaaacaataaagagctgacaatgtaaattaaattaccgattaaaacaatgcacagcAGTTGctattttttgaaaatataaatgaattatACATAATTTTCCCTCACTATCTATTAAAGCACAAATCCTAGAGCTTGTGAAAGTGACACTCTTtggaaacacattttcaagaccaaataatagtaacaataattataatactaatcataattgaaaaaacaaataccccAAGACATTGCTCCAAAACATTATGATATGAAAATCCACATTTTTGCGCTGACTCTGACGTAACATATCAGATTACATCACTCAAGATGGCTACCAAATGTAGGCCATTGCAGGAGCATATGTCCAAAGAAAATGATAGCTTATTTGAAAACCAAGGAACAACACATATTCAAAAAAATTACTATACAGTAAAAACAGAGAATTCTGTATATTTATCCATGGCGACAGAAAAAAAGAGATTCGGATGCTGCTTATGAACTCCTACAGCTGAGTCCTGAAAACCAAGGTTCCCAAGCTTTCCACTGACGTCATGTGCTGCTGGCGGTACGCTGAGtagaatatgtattaataaaaatccAATGATTCAGTCTGTATTGTCTTTGCTCAAGAAATCTTTCTTTTAGCAAAAATATCATGCAGTCTTGAGTCCAAACCCACTTTAGgattttatttagattatttATCTGACGGaggaaaagaaatacaaaggCTTGAAATGTTtatctctctgtttttcttaaacattCAAGTCAttcttttaatacttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104860 True 1370 lncRNA 0.33 1 7391064 7392433

Neighbor

gene id symbol gene type direction distance location
AMCG00021157 NA coding downstream 65612 7223466 ~ 7325452 (-)
AMCG00021156 LOC102292396,LOC102784372 coding downstream 168215 7205421 ~ 7222849 (-)
AMCG00021155 NA coding downstream 289360 7088001 ~ 7101704 (-)
AMCG00021152 tmem164,LOC102783906 coding downstream 311425 7079178 ~ 7079639 (-)
AMCG00021154 LOC106563513 coding downstream 327808 7052536 ~ 7063256 (-)
AMCG00021161 NA coding upstream 47599 7440032 ~ 7441027 (-)
AMCG00021162 dkc1,LOC102780436 coding upstream 77324 7469757 ~ 7479786 (-)
AMCG00021166 tmlhe,LOC106563395,LOC107715863,LOC107562156 coding upstream 90140 7482573 ~ 7491914 (-)
AMCG00021169 LOC107669001,LOC107691958,LOC107562838,LOC107742332,LOC107588216 coding upstream 422695 7815128 ~ 7816111 (-)
AMCG00021173 NA coding upstream 513725 7906158 ~ 7914299 (-)
G84052 gabrb4,LOC108429394,LOC103032374,LOC107727281,LOC107571379 non-coding downstream 149 7390622 ~ 7390915 (-)
G83931 NA non-coding downstream 577630 6812232 ~ 6813434 (-)
G83901 NA non-coding downstream 747541 6643222 ~ 6643523 (-)
G83862 NA non-coding downstream 754157 6569179 ~ 6636907 (-)
G83878 NA non-coding downstream 810645 6578854 ~ 6580419 (-)
G84081 NA non-coding upstream 70295 7462728 ~ 7469428 (-)
G84089 LOC107575789 non-coding upstream 119128 7511561 ~ 7511989 (-)
G84093 NA non-coding upstream 161187 7553620 ~ 7644000 (-)
G84108 NA non-coding upstream 408696 7801129 ~ 7805537 (-)
G84132 NA non-coding upstream 531588 7924021 ~ 7931516 (-)
AMCG00021153 NA other downstream 268573 7115420 ~ 7122491 (-)
G83864 NA other downstream 844487 6544492 ~ 6546577 (-)
G83761 NA other downstream 2639829 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 4672145 2677585 ~ 2718919 (-)
G83428 NA other downstream 4931685 2457001 ~ 2459379 (-)
AMCG00021249 NA other upstream 4701044 12093477 ~ 12100854 (-)
G84814 NA other upstream 5134660 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 5327431 12719864 ~ 12801586 (-)
G84952 NA other upstream 6234902 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 6477506 13869939 ~ 13917868 (-)

Expression


Co-expression Network