G86639


Basic Information

Item Value
gene id G86639
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20355070 ~ 20356479 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108144
GTATAGTTCTACAGACTCCATTATTACGCCTTTGGTGCATTGGTGGACTGCAGTCAGATCTCAGAACCAAATGAAGCTGtgagactgagagacaggaaATCATGTCACAGTATTAATGCACAGGATCACGACCACGACGGCACACTGTCATTCATAGATTTCGAGAAAACCGTCTTGGAGGAACATCTGCTACTGGAGGCTTTTGGGACCTGCCTTCCTGATGCCAAGACTATACTGGCATTTGAAAAGAGAGTGTTTCAGGTTCTTATGGACAGATAAAGCCCTCTGAtgtcctgtcctgtctgtcCTGCCACTCCACAGCCCTGGATCTCCTCCATCCTCCACTCAGCCCGATCCACTTAATTGAGATAACAATTGTCATGTCCACACTTCACattgattaatgtattattataaaagcattacaagtaatacagtaatatagtgcaataatacagtttaaaattacagatcactTCTCCTCTTACCTCAACGACTGGACCTACCTTCTACTCTCTCCGTGC

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU108144 True 524 lncRNA 0.44 3 20355070 20356479

Neighbor

gene id symbol gene type direction distance location
AMCG00021519 krit1 coding downstream 57420 20287321 ~ 20297650 (-)
AMCG00021515 LOC106570209 coding downstream 75695 20275058 ~ 20279375 (-)
AMCG00021516 NA coding downstream 147594 20206322 ~ 20207476 (-)
AMCG00021509 NA coding downstream 392973 19951017 ~ 19962097 (-)
AMCG00021508 NA coding downstream 445397 19905943 ~ 19909673 (-)
AMCG00021521 NA coding upstream 15321 20371800 ~ 20376570 (-)
AMCG00021520 NA coding upstream 21944 20378423 ~ 20389444 (-)
AMCG00021524 fam133b coding upstream 46304 20402783 ~ 20412472 (-)
AMCG00021523 cdk6,LOC106588946,LOC107567973,LOC107667775,LOC107558583 coding upstream 58051 20414530 ~ 20435051 (-)
AMCG00021525 cdk6,LOC107667775,LOC107558583,LOC107722162,LOC107567973 coding upstream 88064 20444543 ~ 20460278 (-)
G86598 NA non-coding downstream 15328 20325693 ~ 20339742 (-)
G86530 NA non-coding downstream 202303 20152220 ~ 20152767 (-)
G86477 NA non-coding downstream 436267 19912537 ~ 19918803 (-)
G86472 NA non-coding downstream 442667 19903996 ~ 19912403 (-)
G86474 NA non-coding downstream 454234 19900458 ~ 19900836 (-)
G86648 NA non-coding upstream 36565 20393044 ~ 20394206 (-)
G86689 NA non-coding upstream 256184 20612663 ~ 20614108 (-)
G86736 NA non-coding upstream 465153 20821632 ~ 20822603 (-)
G86738 NA non-coding upstream 466521 20823000 ~ 20823964 (-)
G86739 col1a2,LOC106570460 non-coding upstream 467543 20824022 ~ 20854294 (-)
G86600 NA other downstream 19766 20329422 ~ 20335304 (-)
AMCG00021514 NA other downstream 70091 20281152 ~ 20284979 (-)
AMCG00021495 acbd7,LOC106595206 other downstream 886288 19446086 ~ 19468782 (-)
G86327 NA other downstream 1077047 19275354 ~ 19278023 (-)
AMCG00021483 NA other downstream 1080630 19259434 ~ 19274440 (-)
G86640 NA other upstream 1822 20358301 ~ 20360255 (-)
G86649 NA other upstream 39133 20395612 ~ 20397783 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other upstream 365405 20721884 ~ 20724880 (-)
G86808 NA other upstream 707379 21063858 ~ 21083570 (-)
AMCG00021569 NA other upstream 1309923 21666402 ~ 21671315 (-)

Expression


Co-expression Network