AMCG00021521


Basic Information

Item Value
gene id AMCG00021521
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20371800 ~ 20376570 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021521
ATGGAGAAGAACCAGTTCAGTGAGCAGCAGCGCACGCCCTACAACCCCAGCGGCTTGGCCATGCACACCACCAGCATCTCGAACCCGGACTACACGCTACAGCCGGATTTCACCCCTGCGCCCGGGAGGATCGCTGTGATTCACCCGGTCCCGGAATACACCTTTATCAGGAAGGTGTACTTAACTCTGATGTGTCAGCTGTTGGTCACAGTGGGACTGATCTGCATGTTTCTATACTGGTACAGCCTACGTATTCCATGTCTTCTCTTCTCGTCTTTTCCCTGCAGACCAGCTGTGTTTGTCCTCATTATTGTGCTGTCGTGCTTCCCACAGGCCCGGCGCCGCATTCCCCTCAACTTCATTTTCCTGGGCTTGTTTACCGCTATGGAGGGGCTAATGCTCGGCTCGGTGACCGTGTTTTTTGCGGCCGACGCTGTGATGTGGGCAGTGGGAGCTACAGGATTCGTGACCTTCGCCCTGAGTGTGTTTGCAATGCAGTCTAAATGGGACTTCACGCTGGCAGCTGGCACGATGTGGGCTATTGGCTGGTCTCTCGTGTCGTTCGGACTTCTGTGTGCGATAATCCGGACCGACTGGCTGTACATCCTGTACGCCTCGCTGGGGACAGTCGTCTTCTCTGTGTACCTGGTGATCGACACCCAGCTGATGCTCGGCGGGAAACACAAGTACAGCATCAACCCAGAGGAGTACATCTTCGCCGCCCTCAACTTGTATCTGGACATCATCaacctcttcctcttcctcctgcagATCATCGGGCTCAGCCGCTAA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021521 True 792 mRNA 0.55 8 20371800 20376570

Neighbor

gene id symbol gene type direction distance location
AMCG00021519 krit1 coding downstream 74150 20287321 ~ 20297650 (-)
AMCG00021515 LOC106570209 coding downstream 92425 20275058 ~ 20279375 (-)
AMCG00021516 NA coding downstream 164324 20206322 ~ 20207476 (-)
AMCG00021509 NA coding downstream 409703 19951017 ~ 19962097 (-)
AMCG00021508 NA coding downstream 462127 19905943 ~ 19909673 (-)
AMCG00021520 NA coding upstream 1853 20378423 ~ 20389444 (-)
AMCG00021524 fam133b coding upstream 26213 20402783 ~ 20412472 (-)
AMCG00021523 cdk6,LOC106588946,LOC107567973,LOC107667775,LOC107558583 coding upstream 37960 20414530 ~ 20435051 (-)
AMCG00021525 cdk6,LOC107667775,LOC107558583,LOC107722162,LOC107567973 coding upstream 67973 20444543 ~ 20460278 (-)
AMCG00021531 calcr coding upstream 241500 20618070 ~ 20638956 (-)
G86639 NA non-coding downstream 15321 20355070 ~ 20356479 (-)
G86598 NA non-coding downstream 32058 20325693 ~ 20339742 (-)
G86530 NA non-coding downstream 219033 20152220 ~ 20152767 (-)
G86477 NA non-coding downstream 452997 19912537 ~ 19918803 (-)
G86472 NA non-coding downstream 459397 19903996 ~ 19912403 (-)
G86648 NA non-coding upstream 16474 20393044 ~ 20394206 (-)
G86689 NA non-coding upstream 236093 20612663 ~ 20614108 (-)
G86736 NA non-coding upstream 445062 20821632 ~ 20822603 (-)
G86738 NA non-coding upstream 446430 20823000 ~ 20823964 (-)
G86739 col1a2,LOC106570460 non-coding upstream 447452 20824022 ~ 20854294 (-)
G86640 NA other downstream 11545 20358301 ~ 20360255 (-)
G86600 NA other downstream 36496 20329422 ~ 20335304 (-)
AMCG00021514 NA other downstream 86821 20281152 ~ 20284979 (-)
AMCG00021495 acbd7,LOC106595206 other downstream 903018 19446086 ~ 19468782 (-)
G86327 NA other downstream 1093777 19275354 ~ 19278023 (-)
G86649 NA other upstream 19042 20395612 ~ 20397783 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other upstream 345314 20721884 ~ 20724880 (-)
G86808 NA other upstream 687288 21063858 ~ 21083570 (-)
AMCG00021569 NA other upstream 1289832 21666402 ~ 21671315 (-)
AMCG00021619 NA other upstream 2778617 23155187 ~ 23160991 (-)

Expression


Co-expression Network