XLOC_006307


Basic Information

Item Value
gene id XLOC_006307
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 52120837 ~ 52136375 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013443
CAGAAGTGCTCATGATCTTGTGTTAAATGTgtattctctctctttctctgtgtttttCAGGCTCTGGGTTGCTGCTATTTCCTCCACGAGTCTCTGAAGAACATCCAGCAGTTTGATTTCcgagCTAAAAAGTTCCGGAAGGTTGTGGGTAAAGAGGTTTATTCAGACGCTCTGAGCAGCACCGCCACCCTGGAGAAGGAGAAGTTTCCTCAAGACTATTTCCCTGagTGTAAATGGTCCAGGAAAGGCTTCATCAGGACCCGGTGGGCTTTGGCTGACTGtgcctTTGACCTGCTGAACATCCACCTGTTCCACGATGCCTCAAACCTGGTGGCCTGGGAGAAAAGCCCATCGGTTTACTCCAGCTCACGGCAGAAAGCACTCGCATACACACTCGAcaggtaagtgtgtgtgtgtatgtgtgggacAGTATCAGTGtgctttagagagagagagaaagagagaga

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013443 True 467 lncRNA 0.49 4 52120837 52136375

Neighbor

gene id symbol gene type direction distance location
XLOC_006306 CABZ01092745.1 coding upstream 15822 52071971 ~ 52105015 (+)
XLOC_006305 CABZ01089777.1 coding upstream 50867 52061034 ~ 52069970 (+)
XLOC_006304 npas4l coding upstream 103824 52006253 ~ 52017013 (+)
XLOC_006303 klhdc3 coding upstream 132621 51981764 ~ 51988216 (+)
XLOC_006302 lclat1 coding upstream 157377 51956397 ~ 51963460 (+)
XLOC_006308 NA coding downstream 33574 52169949 ~ 52174571 (+)
XLOC_006300 NA non-coding upstream 325436 51741554 ~ 51795401 (+)
XLOC_006298 NA non-coding upstream 495270 51617783 ~ 51625567 (+)
XLOC_006296 NA non-coding upstream 658170 51444994 ~ 51462667 (+)
XLOC_006295 NA non-coding upstream 680944 51433834 ~ 51439893 (+)
XLOC_006294 CABZ01094390.1 non-coding upstream 689520 51428398 ~ 51431317 (+)

Expression


Co-expression Network