XLOC_006527 (ckba)


Basic Information

Item Value
gene id XLOC_006527
gene name ckba
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 15682075 ~ 15702736 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012633
ACGCCACACACCTCACTCCTACCGGAAAAATAGCACGGAAAATAGCAATCTTTGTCTCACCACAGTCTTCCACCTAGTTCCTGCGCCCCTCGGAAACAACAGCCATGCCTTTTGGGAACAGTCACAACCAGCTGAAGATGAAGTACTCCTCTGAGCAGGAATACCCCGACCTCAGCAAGCACAACAACTATATGGCCAAGATTCTCACTCCAGGACTGTATGAAAAGTTACGCTCCAAACAGACACCCAGCGGGTTTACACTGGATGATGTAATCCAGACCGGGGTAGATAACCCAGGCCACCCCTTCATTATGACTGTGGGTTGTGTGGCTGGGGATGAGGAGACCTACGAGGTGTTCAAGGAGCTACTGGACCCTGTTATTCAGGACCGACATGGAGGGTACAAGCCAACAGACAAACACAAGACTGATCTAAACCCCAGTAACCTCAAGGGGGGTGATGACCTGGATCCCAATTACGTGCTGAGCTCTCGCGTCAGAACTGGCAGGAGTATCCGTGGATTCTGTTTGCCACCGCACTGCAGCCGTGGAGAGAGGAGAGCTGTAGAGAAGCTCTCAGTACAAGCTTTGGGTGCCCTGGCTGGGGATCTCAAAGGAAAATACTATGCCCTGAAGAACATGACAGAGGCAGAGCAGCAGCAGCTTATCGATGATCACTTCCTGTTCGACAAGCCTGTGTCTCCTCTGCTATTGGCCTCAGGGATGGCTCGTGATTGGCCTGATGCGAGAGGCATCTGGCACAATGACAGCAAGACATTCCTTGTGTGGGTGAATGAGGAAGACCATCTACGTGTCATCTCCATGCAAAAAGGAGGCAAAATGAAGGAAGTCTTCACCCGTTTCTGCATAGGTCTTACTAAGATTGAGGAATTGTTCAGAAACAAGGGTCATGCATTTATGTGGAATGAGCATCTTGGTTACGTCCTCACCTGTCCATCCAACCTCGGAACAGGGCTGCGTGCAGGAGTACATGTCAAACTGCCCAATCTCAGCAAATACCGGCAGTTTGAGGAGATCCTCAAGAGACTGAGGCTGCAAAAACGTGGAACAGGTGGTGTGGACACTGCTGCAGTTGGTGGTGTTTTTGACATCTCTAACGCCGACCGTCTGGGCTTCTCTGAGGTGGAGCTGGTGCAGATGGTGGTGGATGGAGTCAAACTGCTCATAGAGATGGAAAAACGACTGGAGAAGGGCCAGTCTGTAGATGACCTCATGCCTGCTCAAAAGTAGAACACTTCAAGCTCACTTCACACATTTTCTCTTTTAACCTGCCCTTTGTTAGTTCTTTGATTGAATgttgacatatttttattaagtcTTTATAAAGTCTCTGCTCTGAGATCTTGATATGTTAGGCCAACAGATatagagaataaaataaaaaggcagAGAATAAAATTGAGCCCTTGTTGACCTAATTTTTGCGTTTctttattatgttatgttaaataTTCTAGGATTCACACACCTTTCCACCAATTACAAagccaaatcagaaaaagttgggacagtataaaAAAACGCTACATGGTTACAGTATATAATACATTACATGGGCTCAGGTCTACTTTGGCAAACCTCAAGTACTACAATACATAGTTGCATCCACAAATGTCAGTAAAAAtggtactgtgccaaaaggaagccatatgttaacagtgtccagaagcgcctttgacttctctgggctcagaggcatctgggatggaccataaCACAGTGGAAACATACACTGTGATCATATGAATTAGTGGCTCCATTTGAAGATACTCAAAGAGTAAGTAATCATTTTCAAAAAGTACTTACTTACTGAGGACTAAAAGAGTAAGTATCCAACAGCCAGATTTCATTAAGTATAAATAAGATTGCATGTCATCCACTATGTTTACATTATCATGTGACTGACGTTACAAGCGGAACAACTTTAAAGAAATTGCaggtttgaaaaaaaataataacaaattttcAAGTAACCAGCCTAAA
>TCONS_00012634
CGCCACACACCTCACTCCTACCGGAAAAATAGCACGGAAAATAGCAATCTTTGTCTCACCACAGTCTTCCACCTAGTTCCTGCGCCCCTCGTATGACCCCGATCACATTCCTAACACACTCAGGAAACAACAGCCATGCCTTTTGGGAACAGTCACAACCAGCTGAAGATGAAGTACTCCTCTGAGCAGGAATACCCCGACCTCAGCAAGCACAACAACTATATGGCCAAGATTCTCACTCCAGGACTGTATGAAAAGTTACGCTCCAAACAGACACCCAGCGGGTTTACACTGGATGATGTAATCCAGACCGGGGTAGATAACCCAGGCCACCCCTTCATTATGACTGTGGGTTGTGTGGCTGGGGATGAGGAGACCTACGAGGTGTTCAAGGAGCTACTGGACCCTGTTATTCAGGACCGACATGGAGGGTACAAGCCAACAGACAAACACAAGACTGATCTAAACCCCAGTAACCTCAAGGGGGGTGATGACCTGGATCCCAATTACGTGCTGAGCTCTCGCGTCAGAACTGGCAGGAGTATCCGTGGATTCTGTTTGCCACCGCACTGCAGCCGTGGAGAGAGGAGAGCTGTAGAGAAGCTCTCAGTACAAGCTTTGGGTGCCCTGGCTGGGGATCTCAAAGGAAAATACTATGCCCTGAAGAACATGACAGAGGCAGAGCAGCAGCAGCTTATCGATGATCACTTCCTGTTCGACAAGCCTGTGTCTCCTCTGCTATTGGCCTCAGGGATGGCTCGTGATTGGCCTGATGCGAGAGGCATCTGGCACAATGACAGCAAGACATTCCTTGTGTGGGTGAATGAGGAAGACCATCTACGTGTCATCTCCATGCAAAAAGGAGGCAAAATGAAGGAAGTCTTCACCCGTTTCTGCATAGGTCTTACTAAGATTGAGGAATTGTTCAGAAACAAGGGTCATGCATTTATGTGGAATGAGCATCTTGGTTACGTCCTCACCTGTCCATCCAACCTCGGAACAGGGCTGCGTGCAGGAGTACATGTCAAACTGCCCAATCTCAGCAAATACCGGCAGTTTGAGGAGATCCTCAAGAGACTGAGGCTGCAAAAACGTGGAACAGGTGGTGTGGACACTGCTGCAGTTGGTGGTGTTTTTGACATCTCTAACGCCGACCGTCTGGGCTTCTCTGAGGTGGAGCTGGTGCAGATGGTGGTGGATGGAGTCAAACTGCTCATAGAGATGGAAAAACGACTGGAGAAGGGCCAGTCTGTAGATGACCTCATGCCTGCTCAAAAGTAGAACACTTCAAGCTCACTTCACACATTTTCTCTTTTAACCTGCCCTTTGTTAGTTCTTTGATTGAATgttgacatatttttattaagtcTTTATAAAGTCTCTGCTCTGAGATCTTGATATGTTAGGCCAACAGATatagagaataaaataaaaaggcagAGAATAAAATTGAGCCCTTGTTGACCTAATTTTTGCGTTTctttattatgttatgttaaataTTCTAGGATTCACACACCTTTCCACCAATTACAAagccaaatcagaaaaagttgggacagtataaaAAAACGCTACATGGTTACAGTATATAATACATTACATGGGCTCAGGTCTACTTTGGCAAACCTCAAGTACTACAATACATAGTTGCATCCACAAATGTCAGTAAAAAtggtactgtgccaaaaggaagccatatgttaacagtgtccagaagcgcctttgacttctctgggctcagaggcatctgggatggaccataaCACAGTGGAAACATACACTGTGATCATATGAATTAGTGGCTCCATTTGAAGATACTCAAAGAGTAAGTAATCATTTTCAAAAAGTACTTACTTACTGAGGACTAAAAGAGTAAGTATCCAACAGCCAGATTTCATTAAGTATAAATAAGATTGCATGTCATCCACTATGTTTACATTATCATGTGACTGACGTTACAAGCGGAACAACTTTAAAGAAATTGCaggtttgaaaaaaaataataacaaattttcAAGTAACCAGC
>TCONS_00012635
TGCGCTTGTATGTATACATAATGTTACACGTCATACTAAAAATCAAAACAGTGCATTTTGATTTAAACAGCTCTAAGCCGTTAATTGCCGTTAGTACCCAACTGTCGAGACAGACTGAACATTAGCAGCAGCGCCTGTGAAACCCCACTCCTAAAACCGTACAGACGAGCAAAAATGGGCCATATTATGACCCCGATCACATTCCTAACACACTCAGGAAACAACAGCCATGCCTTTTGGGAACAGTCACAACCAGCTGAAGATGAAGTACTCCTCTGAGCAGGAATACCCCGACCTCAGCAAGCACAACAACTATATGGCCAAGATTCTCACTCCAGGACTGTATGAAAAGTTACGCTCCAAACAGACACCCAGCGGGTTTACACTGGATGATGTAATCCAGACCGGGGTAGATAACCCAGGCCACCCCTTCATTATGACTGTGGGTTGTGTGGCTGGGGATGAGGAGACCTACGAGGTGTTCAAGGAGCTACTGGACCCTGTTATTCAGGACCGACATGGAGGGTACAAGCCAACAGACAAACACAAGACTGATCTAAACCCCAGTAACCTCAAGGGGGGTGATGACCTGGATCCCAATTACGTGCTGAGCTCTCGCGTCAGAACTGGCAGGAGTATCCGTGGATTCTGTTTGCCACCGCACTGCAGCCGTGGAGAGAGGAGAGCTGTAGAGAAGCTCTCAGTACAAGCTTTGGGTGCCCTGGCTGGGGATCTCAAAGGAAAATACTATGCCCTGAAGAACATGACAGAGGCAGAGCAGCAGCAGCTTATCGATGATCACTTCCTGTTCGACAAGCCTGTGTCTCCTCTGCTATTGGCCTCAGGGATGGCTCGTGATTGGCCTGATGCGAGAGGCATCTGGCACAATGACAGCAAGACATTCCTTGTGTGGGTGAATGAGGAAGACCATCTACGTGTCATCTCCATGCAAAAAGGAGGCAAAATGAAGGAAGTCTTCACCCGTTTCTGCATAGGTCTTACTAAGATTGAGGAATTGTTCAGAAACAAGGGTCATGCATTTATGTGGAATGAGCATCTTGGTTACGTCCTCACCTGTCCATCCAACCTCGGAACAGGGCTGCGTGCAGGAGTACATGTCAAACTGCCCAATCTCAGCAAATACCGGCAGTTTGAGGAGATCCTCAAGAGACTGAGGCTGCAAAAACGTGGAACAGGTGGTGTGGACACTGCTGCAGTTGGTGGTGTTTTTGACATCTCTAACGCCGACCGTCTGGGCTTCTCTGAGGTGGAGCTGGTGCAGATGGTGGTGGATGGAGTCAAACTGCTCATAGAGATGGAAAAACGACTGGAGAAGGGCCAGTCTGTAGATGACCTCATGCCTGCTCAAAAGTAG
>TCONS_00012636
ATTTAGTGCAGGAGAGCGAACAGACGCCACACACCTCACTCCTACCGGAAAAATAGCACGGAAAATAGCAATCTTTGTCTCACCACAGTCTTCCACCTAGTTCCTGCGCCCCTCGTTTGTTCACAGATGCAGTCACAGATGATGGAAACAACAGCCATGCCTTTTGGGAACAGTCACAACCAGCTGAAGATGAAGTACTCCTCTGAGCAGGAATACCCCGACCTCAGCAAGCACAACAACTATATGGCCAAGATTCTCACTCCAGGACTGTATGAAAAGTTACGCTCCAAACAGACACCCAGCGGGTTTACACTGGATGATGTAATCCAGACCGGGGTAGATAACCCAGGCCACCCCTTCATTATGACTGTGGGTTGTGTGGCTGGGGATGAGGAGACCTACGAGGTGTTCAAGGAGCTACTGGACCCTGTTATTCAGGACCGACATGGAGGGTACAAGCCAACAGACAAACACAAGACTGATCTAAACCCCAGTAACCTCAAGGGGGGTGATGACCTGGATCCCAATTACGTGCTGAGCTCTCGCGTCAGAACTGGCAGGAGTATCCGTGGATTCTGTTTGCCACCGCACTGCAGCCGTGGAGAGAGGAGAGCTGTAGAGAAGCTCTCAGTACAAGCTTTGGGTGCCCTGGCTGGGGATCTCAAAGGAAAATACTATGCCCTGAAGAACATGACAGAGGCAGAGCAGCAGCAGCTTATCGATGATCACTTCCTGTTCGACAAGCCTGTGTCTCCTCTGCTATTGGCCTCAGGGATGGCTCGTGATTGGCCTGATGCGAGAGGCATCTGGCACAATGACAGCAAGACATTCCTTGTGTGGGTGAATGAGGAAGACCATCTACGTGTCATCTCCATGCAAAAAGGAGGCAAAATGAAGGAAGTCTTCACCCGTTTCTGCATAGGTCTTACTAAG
>TCONS_00012637
AAACAGCTCTAAGCCGTTAATTGCCGTTAGTACCCAACTGTCGAGACAGACTGAACATTAGCAGCAGCGCCTGTGAAACCCCACTCCTAAAACCGTACAGACGAGCAAAAATGGGCCATATCAATGCTAAGCTAGCCAGGTTGAACAAGCAGCAGTCAGCCGAGGATGAGTACCCAGACCTTGAGCATCACCACAACCACATGGCCAAGGTTCTCACTCTGGATATGTACAAGCGCCTCCGTCAGCGCTGCACACCCAGTGGCTTCACCATAGATAATGTCATTCAGACTGGCGTAGATAATCCTGGCCACCCCTTCATTATGACTGTGGGTTGTGTGGCTGGGGATGAGGAGACCTACGAGGTGTTCAAGGAGCTACTGGACCCTGTTATTCAGGACCGACATGGAGGGTACAAGCCAACAGACAAACACAAGACTGATCTAAACCCCAGTAACCTCAAGGGGGGTGATGACCTGGATCCCAATTACGTGCTGAGCTCTCGCGTCAGAACTGGCAGGAGTATCCGTGGATTCTGTTTGCCACCGCACTGCAGCCGTGGAGAGAGGAGAGCTGTAGAGAAGCTCTCAGTACAAGCTTTGGGTGCCCTGGCTGGGGATCTCAAAGGAAAATACTATGCCCTGAAGAACATGACAGAGGCAGAGCAGCAGCAGCTTATCGATGATCACTTCCTGTTCGACAAGCCTGTGTCTCCTCTGCTATTGGCCTCAGGGATGGCTCGTGATTGGCCTGATGCGAGAGGCATCTGGCACAATGACAGCAAGACATTCCTTGTGTGGGTGAATGAGGAAGACCATCTACGTGTCATCTCCATGCAAAAAGGAGGCAAAATGAAGGAAGTCTTCACCCGTTTCTGCATAGGTCTTACTAAG
>TCONS_00012638
ATAATCCTGGTAAAAGAACATGCCCTTATCCTGTCAGGATCAGGTTTCAGATAGTTCAGAATGTAAAAATTTAATGTTAGGTATGAATTTATTTGCTTGGCTCCTAATTTGTGTGCCCTGGCTTGTTTCCCATCTCAGGCCACCCCTTCATTATGACTGTGGGTTGTGTGGCTGGGGATGAGGAGACCTACGAGGTGTTCAAGGAGCTACTGGACCCTGTTATTCAGGACCGACATGGAGGGTACAAGCCAACAGACAAACACAAGACTGATCTAAACCCCAGTAACCTCAAGGGGGGTGATGACCTGGATCCCAATTACGTGCTGAGCTCTCGCGTCAGAACTGGCAGGAGTATCCGTGGATTCTGTTTGCCACCGCACTGCAGCCGTGGAGAGAGGAGAGCTGTAGAGAAGCTCTCAGTACAAGCTTTGGGTGCCCTGGCTGGGGATCTCAAAGGAAAATACTATGCCCTGAAGAACATGACAGAGGCAGAGCAGCAGCAGCTTATCGATGATCACTTCCTGTTCGACAAGCCTGTGTCTCCTCTGCTATTGGCCTCAGGGATGGCTCGTGATTGGCCTGATGCGAGAGGCATCTGGCACAATGACAGCAAGACATTCCTTGTGTGGGTGAATGAGGAAGACCATCTACGTGTCATCTCCATGC

Function

symbol description
ckba Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in extracellular space. Is expressed in central nervous system; liver; myotome; and pleuroperitoneal region. Orthologous to human CKB (creatine kinase B).

GO:

id name namespace
GO:0046314 phosphocreatine biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005615 extracellular space cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function
GO:0004111 creatine kinase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060929-902 Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in extracellular space. Is expressed in central nervous system; liver; myotome; and pleuroperitoneal region. Orthologous to human CKB (creatine kinase B).

Ensembl:

ensembl_id ENSDARG00000069752

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012633 False 2003 mRNA 0.45 8 15682075 15700061
TCONS_00012634 False 2029 mRNA 0.45 8 15682080 15700060
TCONS_00012635 False 1375 mRNA 0.50 8 15682828 15702736
TCONS_00012636 False 933 mRNA 0.51 7 15685437 15700084
TCONS_00012637 False 890 mRNA 0.51 6 15685437 15702672
TCONS_00012638 True 666 lncRNA 0.50 4 15685493 15696991

Neighbor

gene id symbol gene type direction distance location
XLOC_006526 BX511166.1 coding downstream 101923 15575137 ~ 15580152 (-)
XLOC_006525 NA coding downstream 224451 15456676 ~ 15457624 (-)
XLOC_006524 rab11fip5a coding downstream 539795 15091264 ~ 15142280 (-)
XLOC_006523 sfxn5a coding downstream 600051 15020822 ~ 15082024 (-)
XLOC_006522 NA coding downstream 700495 14950795 ~ 14981580 (-)
XLOC_006528 bag5 coding upstream 59542 15762278 ~ 15799391 (-)
XLOC_006529 si:ch211-57f7.7 coding upstream 150941 15853677 ~ 15865335 (-)
XLOC_006530 ttl coding upstream 215713 15918449 ~ 15929402 (-)
XLOC_006531 ikzf1 coding upstream 254772 15957508 ~ 15994472 (-)
XLOC_006532 SPATA48 coding upstream 324823 16027559 ~ 16066997 (-)
XLOC_006471 BX537274.2 misc downstream 5417170 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 14855850 825904 ~ 826225 (-)
XLOC_006519 NA non-coding downstream 1148821 14532720 ~ 14533254 (-)
XLOC_006518 AL928929.1 non-coding downstream 1297537 14384421 ~ 14384538 (-)
XLOC_006536 NA non-coding upstream 557915 16260651 ~ 16261573 (-)
XLOC_006537 BX323467.1 non-coding upstream 605031 16307767 ~ 16307883 (-)
XLOC_006538 NA non-coding upstream 1165644 16868380 ~ 16879070 (-)
XLOC_006540 NA non-coding upstream 1791561 17494297 ~ 17530536 (-)
XLOC_006541 NA non-coding upstream 1983748 17686484 ~ 17693819 (-)

Expression


Co-expression Network