XLOC_006519


Basic Information

Item Value
gene id XLOC_006519
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 14532720 ~ 14533254 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013468
GGATGTTTTGTGCTGTAGGGGGCTTTAAAAGATCTCCCATAAGTCTGTTAAGCCTTCTGTTTTCTGTAAGCACTCTAAAAGACGCTGGAGGCTGGCATTACTGCCGCAGGAACTTCACTAACACATTTATCTAACCAATGCAGTGCCGAGGGGCAGCAGATGCAACACAAGCATGGCTCAAGTCTGCGGCTGGTTTGAGCTTTTGACTGTACTGAGGGTAATGAATTGCCTGTCTTATTTTTCACCATCATCTTTTCAAACTAAAGACTAAGTATACTTCATTTTGGAAATATGGTacact

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013468 True 301 lncRNA 0.43 2 14532720 14533254

Neighbor

gene id symbol gene type direction distance location
XLOC_006517 gfra4a coding downstream 45196 14191293 ~ 14487524 (-)
XLOC_006518 AL928929.1 coding downstream 148182 14384421 ~ 14384538 (-)
XLOC_006516 NA coding downstream 517540 14013185 ~ 14015180 (-)
XLOC_006515 ky coding downstream 778629 13743202 ~ 13754091 (-)
XLOC_006514 NA coding downstream 792160 13737542 ~ 13740560 (-)
XLOC_006520 ap5s1 coding upstream 369064 14902318 ~ 14908999 (-)
XLOC_006521 cdc25b coding upstream 382090 14915344 ~ 14929236 (-)
XLOC_006522 NA coding upstream 417541 14950795 ~ 14981580 (-)
XLOC_006523 sfxn5a coding upstream 487568 15020822 ~ 15082024 (-)
XLOC_006524 rab11fip5a coding upstream 558010 15091264 ~ 15142280 (-)
XLOC_006471 BX537274.2 misc downstream 4267815 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 13706495 825904 ~ 826225 (-)
XLOC_006513 CR788322.4 non-coding downstream 862183 13670440 ~ 13670537 (-)
XLOC_006511 CR788322.1 non-coding downstream 888158 13644445 ~ 13644562 (-)
XLOC_006525 NA non-coding upstream 923422 15456676 ~ 15457624 (-)
XLOC_006526 BX511166.1 non-coding upstream 1041883 15575137 ~ 15580152 (-)
XLOC_006536 NA non-coding upstream 1727397 16260651 ~ 16261573 (-)
XLOC_006537 BX323467.1 non-coding upstream 1774513 16307767 ~ 16307883 (-)

Expression


Co-expression Network