XLOC_006515 (ky)


Basic Information

Item Value
gene id XLOC_006515
gene name ky
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 13743202 ~ 13754091 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012620
atgtatttcctgtttaaaaaatgttttcttgtgTTTCCATGTGTAGAGTACGATATAGAGGGATACCTTGGTCTTTCTCAGAAGATTTGTTCTTTAGATGAAGTCATCAGGAATGGAAAAGGTGTATGTAGTGGTTACTCCAATCTCTGTGTGGAAATGTGCAGGGAGGTGGGCATTGAGTGCGTGGAAGTAAGCGGGTACAGCAAAGGTATCGGATACCAGGCCAGGCACAGTTTAGCTGAGGAGTGTTCTGATCATGAGTGGAATGCTGTCTTCATAGACGGTCAGTGGTGGCTGCTTGACGCTTGCTGGGGTGCTGGCACTGTGGATATGAAAAGCAAAACATTTGTAAAGAGGTATGATGACTTTTATTTCCTGACTGAACCCAGTGAATTCATAAACTCTCATTTCCCTGATGACCAAACCTGGCAACTGCTTACCACACCCATCTCCATACAAGAGTTTGAAATGAGACCCTTGAGGACATCAGCATTTTATCAGTTGGGACTGACCCTCATACATCCCAAGCAGTATAAGACAATCACAGAGGATGGGGAAGCAATTGTGTCAGTGAGCTCCTCTAGACTGTTGACCTTTTCGTATGAGATGAGGCAGCATGATCCCCAGACAGGAGCTCTAAAGCAGGAGGAGGTTGACAGCTCCTGTGGTCTCCTGTCAGTAACTCATCAAGGAATGAAGCTGCGATTACTGCCCTCAGAGCCCGGAACCTACGAGGTCAAGCTGTTTGCCCGACGAGAGGGTGAACCTGGTGCTCTGCGGTGGGTTTGTTCTCTTGAACTGGAGTGCCCAAGTGTCCAAAAGAGGCAGCCTCTGCCTGATAACCCCTACTTGAACTGGGGCTTAGCTGCGGGGGCGTCAGCACTAGGTGTCAAGACTTGCAGTGTCGCAGGAGAACAGGCTGTGGAGGTTGCTGATGATGGAGAGTGCAAGGTGATCCTAAACACATCACGACCTCTGATGATGGTGTGTGAGCTCGCACACAATGAGCTTAACGCCACTGCATCCAAGCGCTGCATTGCAATGCAGATAGCAAAAGAGCAGCTGGTGTGCAACGTCATGTGCCCGTACAAAGGATTTTACCGGCTGTCCATGTTCGTGCAGGATTATGACAGTGGAGGTGGGACTTTTCAAAACGCCGGGAATTTCTTGCTGCACCGTCAATGCCAAGGAATGAATCCAAATTCGCTGTATCCTCCAGATCTCAGCCTGTGGTGTGGTTCTGGGATTCGTACTCAAGAAGCAGGCTTGTCACATTTCAGCCACACAGGTGCAATAGTAAATGCACCCCAAGGCCGCTGCAACATCACCTTCCACTCCACCTCACCAGAGCTGCAAATACATGCAGTCCTCTGTGCTGAGCTTCACGAGGAGGCTGACTTTCCTCTGTCCCGATATGTACTCCTAACATTTAATGACACAAAGATAACTGTGAGCGTCTGTGCGCCCAGAGCGGGAGTTTACCGCCTTGGTCTTTATGGGCGCAAACCACCTCAGCAAGACTATAAGCCACTGTGTGACTTTGTAATCAGGAGTGTGTGTGAAAAACATGGAGATCCATTTCCCTGTGTGTATTCAGGATGGGGAAGAGGGTGCGTGCTACTGGAGCCCCGCACAGGTGTGCTGGCCCCACAAAGTTCAGTCAGTTTTCGCGTACGGGTACCAGGTGCACAAAGAGTGTGTGTTGTCGGAGAAAAACGAACGGATCTGAAGATGAATAAGAGCAGAGTTTGGGAAGGTGAGGCAGTCACCGGAAATGCCTCAGTTCTCAAACTCGCATCTGTCGCTAAAGAAAGCAGTGACATGCAGGTTCTCATGACCTTTGATGTCCTTAACCTGGAGAATGAATTGTGA
>TCONS_00012621
GACCTTATCTACCTGCAGTCTCCACCTCTCAGAGGAAACCCAGAAAAGTGCTCTTCACAAGGACTGATGTTTTCAACAAAGTAGATGCATTCTCCATGCAGAAAGGAAGAGAGTTGAGGGAGAAGGAAGAATTTGATGCCCAGAAGATTGCTCATGCAGTCACGGAAGTGGCCAGAAATGAAGTGGAAAAACTCAGGGCCATATGGATCTGGCTGTGTCATAATATTGAGTACGATATAGAGGGATACCTTGGTCTTTCTCAGAAGATTTGTTCTTTAGATGAAGTCATCAGGAATGGAAAAGGTGTATGTAGTGGTTACTCCAATCTCTGTGTGGAAATGTGCAGGGAGGTGGGCATTGAGTGCGTGGAAGTAAGCGGGTACAGCAAAGGTATCGGATACCAGGCCAGGCACAGTTTAGCTGAGGAGTGTTCTGATCATGAGTGGAATGCTGTCTTCATAGACGGTCAGTGGTGGCTGCTTGACGCTTGCTGGGGTGCTGGCACTGTGGATATGAAAAGCAAAACATTTGTAAAGAGGTATGATGACTTTTATTTCCTGACTGAACCCAGTGAATTCATAAACTCTCATTTCCCTGATGACCAAACCTGGCAACTGCTTACCACACCCATCTCCATACAAGAGTTTGAAATGAGACCCTTGAGGACATCAGCATTTTATCAGTTGGGACTGACCCTCATACATCCCAAGCAGTATAAGACAATCACAGAGGATGGGGAAGCAATTGTGTCAGTGAGCTCCTCTAGACTGTTGACCTTTTCGTATGAGATGAGGCAGCATGATCCCCAGACAGGAGCTCTAAAGCAGGAGGAGGTTGACAGCTCCTGTGGTCTCCTGTCAGTAACTCATCAAGGAATGAAGCTGCGATTACTGCCCTCAGAGCCCGGAACCTACGAGGTCAAGCTGTTTGCCCGACGAGAGGGTGAACCTGGTGCTCTGCGGTGGGTTTGTTCTCTTGAACTGGAGTGCCCAAGTGTCCAAAAGAGGCAGCCTCTGCCTGATAACCCCTACTTGAACTGGGGCTTAGCTGCGGGGGCGTCAGCACTAGGTGTCAAGACTTGCAGTGTCGCAGGAGAACAGGCTGTGGAGGTTGCTGATGATGGAGAGTGCAAGGTGATCCTAAACACATCACGACCTCTGATGATGGTGTGTGAGCTCGCACACAATGAGCTTAACGCCACTGCATCCAAGCGCTGCATTGCAATGCAGATAGCAAAAGAGCAGCTGGTGTGCAACGTCATGTGCCCGTACAAAGGATTTTACCGGCTGTCCATGTTCGTGCAGGATTATGACAGTGGAGGTGGGACTTTTCAAAACGCCGGGAATTTCTTGCTGCACCGTCAATGCCAAGGAATGAATCCAAATTCGCTGTATCCTCCAGATCTCAGCCTGTGGTGTGGTTCTGGGATTC

Function

symbol description
ky Is expressed in skeletal muscle. Human ortholog(s) of this gene implicated in myofibrillar myopathy 7. Orthologous to human KY (kyphoscoliosis peptidase).

GO: NA

KEGG:

id description
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-090313-64 Is expressed in skeletal muscle. Human ortholog(s) of this gene implicated in myofibrillar myopathy 7. Orthologous to human KY (kyphoscoliosis peptidase).

Ensembl:

ensembl_id ENSDARG00000074036

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012620 False 1872 mRNA 0.49 4 13743202 13751017
TCONS_00012621 True 1431 mRNA 0.49 6 13743825 13754091

Neighbor

gene id symbol gene type direction distance location
XLOC_006514 NA coding downstream 2642 13737542 ~ 13740560 (-)
XLOC_006513 CR788322.4 coding downstream 72665 13670440 ~ 13670537 (-)
XLOC_006512 pimr47 coding downstream 80578 13660564 ~ 13662624 (-)
XLOC_006511 CR788322.1 coding downstream 98640 13644445 ~ 13644562 (-)
XLOC_006510 NA coding downstream 152632 13587296 ~ 13590570 (-)
XLOC_006516 NA coding upstream 259094 14013185 ~ 14015180 (-)
XLOC_006517 gfra4a coding upstream 437202 14191293 ~ 14487524 (-)
XLOC_006518 AL928929.1 coding upstream 630330 14384421 ~ 14384538 (-)
XLOC_006519 NA coding upstream 778629 14532720 ~ 14533254 (-)
XLOC_006520 ap5s1 coding upstream 1148227 14902318 ~ 14908999 (-)
XLOC_006471 BX537274.2 misc downstream 3478297 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 12916977 825904 ~ 826225 (-)
XLOC_006507 NA non-coding downstream 986541 12748652 ~ 12756661 (-)
XLOC_006522 NA non-coding upstream 1196704 14950795 ~ 14981580 (-)
XLOC_006525 NA non-coding upstream 1702585 15456676 ~ 15457624 (-)

Expression


Co-expression Network