XLOC_006514


Basic Information

Item Value
gene id XLOC_006514
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 13737542 ~ 13740560 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013766
attttattgtgttactttgtcataaatacaacatatatatatattagaaaaaaGCATCAGTCACAGGAGAAAACACGAGTTACAGTAGTTTTGTGCAAACAACACTCAAATTTAGAATTTTCACAAACTTTTGTTTAACGccttcaaacaaacaaaagatactaaaagaaaagtgatttaagaaCTTTTGGCACTTTCAAGTAGAATCATCTGAAATCTTGTTCAGTTAAGAAGATATCAAAGATATCATGAACTCCGAGCACTGGATATTCTGAAGCTGAGAACACGAGAAATGTGCTGTCTGAATGACCAGCTTCTGGTTGGTTATTAAGATCAGGTTTAGAGGCAGGACAAGATAAAAAAGTTTTGGTCAGGAACAAGCAACAAGTGACCGTTGAAATTCTAATAATATTGTATATGATTATAATTGTTTGCCACTAAAAGGCAAATTTGAGAAAGTGCTAATAGTTGACCATTTTGAAAACCCAGGCCAGTTTGTGTTTAGTAaaacttaatgaaaaaaaaacaaacaacataaatcCACCCCTCTTCTCTGAATAGCATTGTAGACACTAATTTAAGATTTTTCTTgacatattaatgtcaacaaccTTTCCACCAAACTCTGTTTTATTCCTCTAACCTCAACTCCACAAGCACATCTGTGCGGGCCAGAGAGGGTTCAAGCACATAATACCAGGAACTGCCTCTGGAGGGCCTCACTAGAGTCCTCTATGATGAGGAGCAAAAGGCAAGATTCATCAAGCTTCTAAACCCATCAGTCCAAGTTTAAGACACAAGAATTTATCATTTTCTCATTCTCGAATTTTACACGGTGGCCCTCCAGTGCCTTTCTGTTACCCAGCAGACCCTTACTGACCCTTTACACTTATAGACAAACAACTCATCATATCCTTTCACCAACACTGGGGCTTGGCTCAGCCCGGGGATGCCCCTGCTCTCTGCCAAGACTGTGCAGCGGCAGCCAAAAATCTCTCACAGGAGAATCTGCTTCGCCTGAGGAATACTATCATCTGGCTCCAATTGAATTGATTTCACAGCGTTAGAAAAATAGATTTTGCGAAGATAAATCACGTTTTCCAATATGAAAAATAGATCAAACTCTTTGCTATTTCTTTCTTGGTTGTTCCAGTTTGGTGAAAGGCATTTCAGTTAGCATAAATTAGACATCTCAACACATGAGGATGTGCTAAAATGGCCGCTACTATCAACTACACATTATATAAGTGTTAAGTAGCCCTGTACCCTTTAAGGACAGCTGCTGTGTAGAACCCGACTAATAGCAACACCACAAGCTAAAttagctgctgtgtgtgtgtgtgtggcacatCGGTGATTGTGATTCAGCACTCATGAAGTGACTGCTTACCTTTGAGGCTCTGTCACCTATTAGCGAGTAGTCAGATTCTCATTGCTTGACGGTTTACAGCGAGTCTACATCTCAGCAACGTCCTTTCAGAGTTTCTTCACAACAGGGCGGCCTTGAGTAAGACTGCACTTGCATACTGACAAGGTACAGAAGTGTCAAGAGACATAAAGGCAACATTACCATATTATAAATCTCAAAGGGAACACTAAAAAAGGCCCATAGCAACATTACCACTATGTAGCTTAATAAATCTCCACAGTAATCCCCACAAAAGAGTGAATATGGCTTGGTGAAAGAGCTGCTAACCATGTAGTGTATGAACAGCGGTACAGTATATTGCAGCACAGAAGAGACCAGCAGTGTCCGGGTTTCTTTGGAAGTGCTCCTTTAGTAGCGCCGTGATCATTTCAAAAGGCATTACTTTTAAGGCTCAAAGGtcaaatgtgtgtatatacacatgtaCAACACTGCTGCTCTCCTGCTGTGTGTGATTAGTGGAAGTAAACATGCATAGAATTACACGCACCCCAGGATAGAGCTAAAGTATGACCGTAATACTGAACGGTGCAGATCTAGTACAGTACAGGGGTGATTTACACACACTACTTCTGCATCTGCCATGCCTTTGTACTCGGCAAGCACTGGTTTAACACAGCAAACCCATTCCTGGTGCTAAACATGAACCCAACACCAACACACATCAAGTCAATCCGATTAAGAACACATTAGAACTCCTAATAATAAACCGTTCATCATGCCCTGATACCCTAACCCTCCTAAAATGGGTGATCTGAACCACGGCTGTGTTAATCACATCAGAATGGCTGAAAAGAGAAGAGCAGCAGATGAGAGATCCTTAGCCCTGATCCTCACAGCGGGGGTCGATAGATTGACAGAGGCTGACTGAGGGCAGGTGCAATGCACCTGCCTTTCCAGATGCACACGGCTGGAAATGAGCCTTCTGTTTGATCACTTTCAGCCTCACTGACAAACTTCATTACGATTCAGCTCAATATGTCTGCAGGCACTGGAATTACAGTAGGAAAACCTTCATTCCAGGGTGCTTCACCAATGCAAACAACATAACGATCTGGGCATCCCTGAAATATTaacccctaatttctgtttaccttccattttataatacattttctgCTTGGCTGTTTTACACAACAGTGTTTCAGCTTTCTCTGGTACTATTTACAGTCATCGTATGTTGGGCAAAGGATCTCTCATTAGGCTGTGATATTTCTCTCTGGCTGTGAGCTAAATCCTCCCCAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013766 True 2671 lncRNA 0.41 2 13737542 13740560

Neighbor

gene id symbol gene type direction distance location
XLOC_006513 CR788322.4 coding downstream 67005 13670440 ~ 13670537 (-)
XLOC_006512 pimr47 coding downstream 74918 13660564 ~ 13662624 (-)
XLOC_006511 CR788322.1 coding downstream 92980 13644445 ~ 13644562 (-)
XLOC_006510 NA coding downstream 146972 13587296 ~ 13590570 (-)
XLOC_006509 fgfr3 coding downstream 442670 13213567 ~ 13294872 (-)
XLOC_006515 ky coding upstream 2642 13743202 ~ 13754091 (-)
XLOC_006516 NA coding upstream 272625 14013185 ~ 14015180 (-)
XLOC_006517 gfra4a coding upstream 450733 14191293 ~ 14487524 (-)
XLOC_006518 AL928929.1 coding upstream 643861 14384421 ~ 14384538 (-)
XLOC_006519 NA coding upstream 792160 14532720 ~ 14533254 (-)
XLOC_006471 BX537274.2 misc downstream 3472637 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 12911317 825904 ~ 826225 (-)
XLOC_006507 NA non-coding downstream 980881 12748652 ~ 12756661 (-)
XLOC_006502 NA non-coding downstream 1150130 12586997 ~ 12587412 (-)
XLOC_006522 NA non-coding upstream 1210235 14950795 ~ 14981580 (-)
XLOC_006525 NA non-coding upstream 1716116 15456676 ~ 15457624 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location