CI01000000_01978179_01992602 (PPP2R2BB, PPP2R2B, PPP2R2B.L)


Basic Information

Item Value
gene id CI01000000_01978179_01992602
gene name PPP2R2BB, PPP2R2B, PPP2R2B.L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1978179 ~ 1992961 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_01978179_01992602.mRNA
CTGACATCATCTCTACTGTGGAGTTCAACTCTACTGGAGAGCTCTTGGCCACAGGAGACAAGGGAGGAAGAGTTGTGGTTTTCCAAAGAGAGCAAGAGAGCAAGAACCAGCCTCACAGACGTGGGGAGTATAATGTTTACAGCACGTTTCAGAGTCACGAGCCGGAGTTTGACTACCTGAAGAGTTTAGAGATTGAGGAGAAGATCAATAAGATACGCTGGCTGCCTCAGCAGAATGCTGCATACTTCCTGCTCTCCACCAATGATAAAACTGTGAAACTGTGGAAGATCAGTGAGAGGGATAAGAGACCAGAAGGATATAACCTGAAGGATGAAGATGGAAGAATCAGAGACCCGGCCACCATCACCACATTACGGGTGCCAGTACTGCGGCCTATGGACCTCATGGTTGAGGCCGCACCTCGGAGAGTGTTTTCCAATGCACACACATACCACATCAACTCCATCTCTGTCAACAGTGACTACGAGACCTTCATGTCCACCGATGACTTAAGGATCAACCTGTGGAACCTGGAGATCACAAACAGAAGCTTCAGTATCCTTTGTAATGTCATTAAAGTTGACAGAAATATGTTTTTGAAAAAGAAAGTGTATTATTTCCCTGGCGAGCCGGTTTTCGAGGAGCCAGAAGACCCAAGCAATCGTTCCTTTTTCTCTGAAATCATCTCCTCCATCTCTGACGTAAAATTTAGCCACAGTGGGCGGTACCTGATGACACGTGACTACCTGACTGTAAAGGTCTGGGATCTGAACATGGAGAGCAAACCACTGGAAACCTATCAGGTACATGATTACCTAAGAAGTAAGCTCTGCTCGCTGTATGAGAATGACTGCATCTTCGATAAATTTGAATGTGTTTGGAATGGATCAGACAGCGTGATCATGACTGGTTCCTACAACAACTTCTTCCGAATGTTCGACCGTAATACGAAGCGTGATGTGACACTGGAGGCGTCCCGGGAGAACAGCAAGCCTCGGGCAATTCTGAAACCTCGTAAGGTGTGTGTGGGCGGAAAGCGCCGCAAAGATGAAATCAGTGTGGACAGCCTGGACTTCAGCAAGAAAATTCTCCACACCGCCTGGCATCCTTCCGAGAACATCATCGCTGTGGCAGCCACCAATAACCTTTACATATTCCAGGATAAGGTCAACTAGCACAACTGTACCACCTCCACATGTTCCTGAGAAGAGAGAGAAAGAGGAAAAAACGCTGTAGCCCAGCAGGATATTCCAGGGTGTGTTTTGTGATGAGAAACATGAAGTTACCTATGATGTGGGCAGAAGTATGAACAGATTGTGCTGGGTAAGAAGGCCATGTTGTGCAAGGATGCTGCCAGACTTTCACAAACAAGAAGCATCCTGCCCTGCACAATCATTCTTCCTCTATTAAGTACCTGCATTTCTTCTTCCATAAACTCTTGTTTATTTATCGTATTTATTCATTTCTCTGCTGGAAGGAAATGCCTGACTCTTTAAATCTGGACAAACGTGCATTTTCATTGCTATGAAAAAGA

Function

symbol description
ppp2r2bb Predicted to enable protein phosphatase regulator activity. Predicted to be involved in peptidyl-serine dephosphorylation. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in Alzheimer's disease; brain disease; breast cancer; and spinocerebellar ataxia type 12. Orthologous to human PPP2R2B (protein phosphatase 2 regulatory subunit Bbeta).
ppp2r2b Predicted to enable protein phosphatase regulator activity. Predicted to be involved in peptidyl-serine dephosphorylation; positive regulation of neuron apoptotic process; and regulation of phosphoprotein phosphatase activity. Predicted to be located in mitochondrial outer membrane. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol. Implicated in Alzheimer's disease; brain disease; breast cancer; and spinocerebellar ataxia type 12. Biomarker of systemic lupus erythematosus.

GO:

id name namespace
GO:0005856 cytoskeleton cellular_component

KEGG:

id description
K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_01978179_01992602.mRNA True 1534 mRNA 0.46 8 1978179 1992961

Neighbor

gene id symbol gene type direction distance location
CI01000000_01916310_01925119 NA coding upstream 52789 1916052 ~ 1925390 (+)
CI01000000_01899373_01901550 TSTD2 coding upstream 76497 1899373 ~ 1901682 (+)
CI01000000_01898604_01899281 NA coding upstream 78898 1898042 ~ 1899281 (+)
CI01000000_01879407_01879559 NA coding upstream 98199 1879407 ~ 1879980 (+)
CI01000000_01848610_01851296 NA coding upstream 126281 1847543 ~ 1851898 (+)
CI01000000_01996254_01997531 GPR151 coding downstream 3113 1996074 ~ 1997617 (+)
CI01000000_02018856_02033091 EXOSC3 coding downstream 25636 2018597 ~ 2034379 (+)
CI01000000_02080057_02086228 REST coding downstream 86870 2079831 ~ 2087510 (+)
CI01000000_02092375_02096188 POLR2B.L, RPB2, POLR2B coding downstream 99332 2092293 ~ 2096188 (+)
CI01000000_02237986_02243555 NA coding downstream 244733 2237694 ~ 2243820 (+)
G700 NA non-coding upstream 58615 1919256 ~ 1919564 (+)
G699 NA non-coding upstream 59237 1918732 ~ 1918942 (+)
G579 NA non-coding upstream 70020 1767917 ~ 1908808 (+)
G645 NA non-coding upstream 135011 1842322 ~ 1843168 (+)
G593 NA non-coding upstream 243790 1733247 ~ 1734389 (+)
G710 NA non-coding downstream 30800 2023761 ~ 2023971 (+)
G717 NA non-coding downstream 45072 2038033 ~ 2038258 (+)
G718 NA non-coding downstream 45516 2038477 ~ 2038716 (+)
G719 NA non-coding downstream 45896 2038857 ~ 2039092 (+)
G721 NA non-coding downstream 47403 2040364 ~ 2040732 (+)
G435 NA other upstream 545325 1425121 ~ 1432854 (+)
G350 NA other upstream 1301242 671842 ~ 676937 (+)
G252 NA other upstream 1471107 503209 ~ 507072 (+)
G2774 NA other downstream 2460817 4453778 ~ 4454232 (+)
G2850 NA other downstream 2733025 4725986 ~ 4726482 (+)
G6811 NA other downstream 8211870 10204831 ~ 10321679 (+)
G6820 NA other downstream 8434262 10427223 ~ 10433018 (+)
G7018 NA other downstream 8985528 10978489 ~ 10980872 (+)

Expression


Co-expression Network