G2742 (prss12,LOC107551563,LOC107754187,LOC107656290,LOC107702379,LOC107591549,LOC107750419)


Basic Information

Item Value
gene id G2742
gene name prss12,LOC107551563,LOC107754187,LOC107656290,LOC107702379,LOC107591549,LOC107750419
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11927551 ~ 11928996 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3979
CCTTATTCAGAGGTATGGCACATGCCCATGTCTCTAGTATAATACATGCATCTCAAAACTACAATTTCAAACACTGAGTGATTGCCAAATTGCATCGCACTGGCTTGCTCGTCACAGCTCCGACCGTCTCGCGCGCCAGAAATAACCCAGCAAGAGAGCGAGCGCTCGTGCGCAATTAAGAACTCCTAAAGAGCCAACGTCGCCGCCGAAATGATTACAAATGACAAAACCTGCTGTTTATCTTGAAGCCCGTGATTAAACGACCTCTCGCGCCGGACGAGAGCGCTGGCTTTGTTCTCAGTATAGGTAGGCTACCTGGGGCGCGCATACCTTTCCCACGCGTGGACGCTTTTAGTTTGAACACGTCTTAGCTTGCACGCGTGCCCTGCACTGTTTTTGACCTGCCTAACGTTTCATTCTGAATCATACGTTTAGCAGACTATTTAAGATTAAAAGCAACTCGTAAAAATCTTAAACAACTCAGGCTCTCGGAGTCGCAGTACCCCCAGTCTATGCGTCCCCGGCTGTTTGGGAAGAAGCACCAGGGCCGAATTCTTCCGTCCGGGTTCCGGCAAAAACTATGCTCCCCGAGCCCTTTGCCCAGATAGCGCTCTGTAACACCCGGCACATCGCTCCAGTTCATGCATTTCACGCCTGATTCGGTGGAGTCTATGGATCCCTCGTAAAACCCCGCTTTCCCTTTGCTTTGAACGCAGTCGGTGAACAGAGACCCGTCACTGAACGCGATGAGCAGCGAGCAGACGGCGAAGAGAAATCGACATCTCGCATCCATCACGATCAACCTGTCACTGTCACCGTAACCTAAAAAACGATAGCAGTTCCTCTCCAGTTGCTTTATGTGGAGACATGGTCCTTGGGTTGTCTCATATCTTGTCTTTGGCTGTTATCGGAGCAGCTCAGACGCGGATCAATAAAAGAGAAAGCGAGGAAGACCGGGCTTTAATGACTCATGCATATTGATGATTGAGTCACCGGAGATTTGAAGTCTTTCGAAAGAAGGTCAAAATCAGTATATGATGTCTCAAGTCAAATTGTCAAGGTGCAGAATAACCAAAGTAATtgataataaacaaataaacggTTGAAAAGCACTTCCAGTAAACTAGTCTCTACATCAGACAGGCTTCTGTGGGACGGTCCGGGATCAAATGCACGCGCAGAACCTCTCACAAAAACCTGCACTTGTGTGCCGGCATTGTTTCAGTAAGACTCTGCTCACTGCTTTTGGTCTCTCCGGGGCTCTGCTGTGAAATCTTCTGTTCACGGATTTAGGGATAATGAGCAACAGTCGAAACAAGGTTCGTGTCTGCCCTCTTGTGTCGGTAAAATATAACCAAGAG

Function

symbol description
prss12 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in zymogen activation. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be active in several cellular components, including dendrite; synaptic cleft; and terminal bouton. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability and intellectual disability. Orthologous to human PRSS12 (serine protease 12).

NR:

description
PREDICTED: neurotrypsin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3979 True 1361 lncRNA 0.48 2 11927551 11928996

Neighbor

gene id symbol gene type direction distance location
mettl14 mettl14,LOC107591585,LOC107754186 coding downstream 729 11923120 ~ 11926822 (-)
LOC122351032 LOC107754184,LOC107551556,LOC107656104 coding downstream 9344 11910750 ~ 11918207 (-)
grhprb grhprb,LOC107702374,LOC107656243,LOC107754183,LOC107591546,LOC108444366 coding downstream 76896 11847007 ~ 11850655 (-)
tma16 tma16,LOC107754160,LOC107551564,LOC107656272 coding downstream 108679 11816476 ~ 11818872 (-)
polr1e polr1e,LOC107754182,LOC107754175 coding downstream 198287 11725127 ~ 11729264 (-)
ndst3 ndst3,LOC107551574,LOC107591550,LOC107702380,LOC107750457,LOC108439183,LOC108260488,LOC107656734 coding upstream 31374 11960370 ~ 12094894 (-)
tll1 tll1,LOC107548346,LOC107745060,LOC107656041,LOC107591552,LOC107750422,LOC107702281 coding upstream 232841 12161837 ~ 12195683 (-)
cpe NA coding upstream 282440 12211436 ~ 12225082 (-)
klhl2 klhl2,LOC107745059,LOC107655955,LOC107702385,LOC107591556 coding upstream 307209 12236205 ~ 12246905 (-)
rapgef2a LOC107745058,LOC107548350,LOC107655945 coding upstream 319499 12248495 ~ 12281828 (-)
G2690 NA non-coding downstream 17541 11849622 ~ 11910010 (-)
LOC122328967 NA non-coding downstream 131558 11793815 ~ 11795993 (-)
G2665 NA non-coding downstream 156044 11771236 ~ 11771507 (-)
G2664 NA non-coding downstream 156574 11770764 ~ 11770977 (-)
G2663 NA non-coding downstream 156967 11769442 ~ 11770584 (-)
G2750 NA non-coding upstream 213910 12142906 ~ 12150716 (-)
G2826 NA non-coding upstream 360833 12289829 ~ 12290106 (-)
G2829 NA non-coding upstream 406356 12335352 ~ 12336759 (-)
G2837 NA non-coding upstream 497217 12426213 ~ 12442443 (-)
LOC122348535 ncapd3,LOC107709432,LOC107702392,LOC107750432,LOC107655906,LOC107591581 non-coding upstream 498171 12427167 ~ 12443883 (-)
apela NA other downstream 138885 11783629 ~ 11788666 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 346834 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 414718 11510439 ~ 11512833 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other downstream 515838 11407565 ~ 11411713 (-)
LOC122343263 NA other downstream 530975 11395734 ~ 11396576 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other upstream 168914 12097910 ~ 12117383 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other upstream 408966 12337962 ~ 12366108 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 975203 12904199 ~ 12926482 (-)
smim18 NA other upstream 1040097 12969093 ~ 12973012 (-)
smim14 smim14,LOC107757606,LOC107700293 other upstream 1225490 13154486 ~ 13159444 (-)

Expression


Co-expression Network