zgc:195282 (zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812)


Basic Information

Item Value
gene id zgc:195282
gene name zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11407565 ~ 11411713 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3709
GTCGCTGCACCTCTTGCCACATCCTTTGCTGTACCAAAAGGCTGTCACAGTTGAGACGATCGCATGCATATTTCCTGCGTCTCAACATCTCACGTATCACAAACTGGTAGAGACCTGCTACAACCATGGTGAGCTTCTGTCCTATATGTGGGAAGCCTGTTTATTTTGGTGAGAAGAAGAGGTCATTGGGACGGGATTATCATCCGTTGTGCTTGAAGTGTCACAGGTGTAAAAGACAGCTAACGGCTGGCCAGCATGCAGAGCACGATGAGAAGCCATACTGCACTAACTGCTACATGAGAGATTTTGGTCCCAGAGGTAGCCGAAAACCCGTCGCCCGGACCTCTAACACAGCGGCTTCTTAAGAGGGGTCTTGCAGTCttgaaaaacacacagcatcTGGAtctacaaacaacaataaaactacAGTATACGTTTTACACTGCCACACACAGCAAACCACTGTTAGATACCGCCAAGTTGATCTCTCCTTACCACAGAATAAAACACGACTCCACCCTTACGACTCATAAAAATAACCAGAACCTGCCAAAACATCGGCCGTCCACGTTGGCAGTTTTTCAGGGAAATGAGCTACTTCGTGTgttgaaatcttttaaaatctaAGAAATCGTTTGCTTTAATCTCACCGTTAATGTTGTACAGAGTTTTTCGATTGAGTTGTATTTTATGCTTTAGAATGGGAGACGTGAAATTATAACTATAGTGAATTGAATGTTGGTGTAGAAGGCAGCTATACAagtattgtgtgtttttgttttcaagaCTTCTGTATAccattaattaattgattaactTGAAACactgtgggatttttttttttgtctgctttattattgtttgttcttTTCCGGGATTTTGTGGATCAGAGGCAATAAAACAAAGAGTTTTTCGCGAGGCAGCAAATGTATCTACAAAGCGAAAAAGACAATAATTAATCATTGTGTCTTTTTAATTAGAAGCAGAAGCTCGTGTCCCAAACCTCATGGTGCATAAGTGATGGcttcatcatttttttgttaattcagGAAGAATACATATTTGATTTTAcgattttatctgtttttttcttattagttGATTGAAAGGAAGTGTCACTCAGAGAGCTGCCAGTTAGCGTATTGTTAACACATTGAATAAGAAGAATAATTTAATGTCTCTTATCCTCAAATccataaaataaactgtaaaaaattataatacaataattattatgaattttatGGAACACTTTTTTCTCTGttgaaaactgcatttatataattgaaGATTTATACCTCAAAGTGTAACT
>TU3710
ACAGTTGAGACGATCGCATGCATATTTCCTGCGTCTCAACATCTCACGTATCACAAACTGGTAGAGACCTGCTACAACCATGGTGAGCTTCTGTCCTATATGTGGGAAGCCTGTTTATTTTGGTGAGAAGAAGAGGTCATTGGGACGGGATTATCATCCGTTGTGCTTGAAGTGTCACAGGTGTAAAAGACAGCTAACGGCTGGCCAGCATGCAGAGCACGATGAGAAGCCATACTGCACTAACTGCTACATGAGAGATTTTGGTCCCAGAGGTAGCCGAAAACCCGTCGCCCGGACCTCTAACACAGCGGCTTCTTAAGAGGGGTCTTGCAGTCttgaaaaacacacagcatcTGGAtctacaaacaacaataaaactacAGTATACGTTTTACACTGCCACACACAGCAAACCACTGTTAGATACCGCCAAGTTGATCTCTCCTTACCACAGAATAAAACACGACTCCACCCTTACGACTCATAAAAATAACCAGAACCTGCCAAAACATCGGCCGTCCACGTTGGCAGTTTTTCAGGGAAATGAGCTACTTCGTGTgttgaaatcttttaaaatctaAGAAATCGTTTGCTTTAATCTCACCGTTAATGTTGTACAGAGTTTTTCGATTGAGTTGTATTTTATGCTTTAGAATGGGAGACGTGAAATTATAACTATAGTGAATTGAATGTTGGTGTAGAAGGCAGCTATACAagtattgtgtgtttttgttttcaagaCTTCTGTATAccattaattaattgattaactTGAAACactgtgggatttttttttttgtctgctttattattgtttgttcttTTCCGGGATTTTGTGGATCAGAGGCAATAAAACAAAGAGTTTTTCGCGAGGCAGCAAATGTATCTACAAAGCGAAAAAGACAATAATTAATCATTGTGTCTTTTTAATTAGAAGCAGAAGCTCGTGTCCCAAACCTCATGGTGCATAAGTGATGGcttcatcatttttttgttaattcagGAAGAATACATATTTGATTTTAcgattttatctgtttttttcttattagttGATTGAAAGGAAGTGTCACTCAGAGAGCTGCCAGTTAGCGTATTGTTAACACATTGAATAAGAAGAATAATTTAATGTCTCTTATCCTCAAATccataaaataaactgtaaaaaattataatacaataattattatgaattttatGGAACACTTTTTTCTCTGttgaaaactgcatttatataattgaaGATTTATACCTCAAAGTGTAACT
>TU3711
GTCGCTGCACCTCTTGCCACATCCTTTGCTGTACCAAAAGGCTGTCACAGTTGAGACGATCGCATGCATATTTCCTGCGTCTCAACATCTCACGTATCACAAACTGGTAGAGACCTGCTACAACCATGGTGAGCTTCTGTCCTATATGTGGGAAGCCTGTTTATTTTGGTGAGAAGAAGAGGTCATTGGGACGGGATTATCATCCGTTGTGCTTGAAGTGTCACAGGTGTAAAAGACAGCTAACGGCTGGCCAGCATGCAGAGCACGATGAGAAGCCATACTGCACTAACTGCTACATGAGAGATTTTGGTCCCAGAGGTAGCCGAAAACCCGTCGCCCGGACCTCTAACACAGCGGCTTCTTAAGAGGGGTCTTGCAGTCttgaaaaacacacagcatcTGGAtctacaaacaacaataaaactacAGTATACGTTTTACACTGCCACACACAGCAAACCACTGTTAGATACCGCCAAGTTGATCTCTCCTTACCACAGAATAAAACACGACTCCACCCTTACGACTCATAAAAATAACCAGAACCTGCCAAAACATCGGCCGTCCACGTTGGCAGTTTTTCAGGGAAATGAGCTACTTCGTGTgttgaaatcttttaaaatctaAGAAATCGTTTGCTTTAATCTCACCGTTAATGTTGTACAGAGTTTTTCGATTGAGTTGTATTTTATGCTTTAGAATGGGAGACGTGAAATTATAACTATAGTGAATTGAATGTTGGTGTAGAAGGCAGCTATACAagtattgtgtgtttttgttttcaagaCTTCTGTATAccattaattaattgattaactTGAAACactgtgggatttttttttttgtctgctttattattgtttgttcttTTCCGGGATTTTGTGGATCAGAGGCAATAAAACAAAGAGTTTTTCGCGAGGCAGCAAATGTATCTACAAAGCGAAAAAGACAATAATTAATCATTGTGTCTTTTTAATTAGAAGCAGAAGCTCGTGTCCCAAACCTCATGGTGCATAAGTGATGGcttcatcatttttttgttaattcagGAAGAATACATATTTGATTTTAcgattttatctgtttttttcttattagttGATTGAAAGGAAGTGTCACTCAGAGAGCTGCCAGTTAGCGTATTGTTAACACATTGAATAAGAAGAATAATTTAATGTCTCTTATCCTCAAATccataaaataaactgtaaaaaattataatacaataattattatgaattttatGGAACACTTTTTTCTCTGttgaaaactgcatttatataattgaaGATTTATACCTCAAAGTGTAACTGCCTACAATTGgaatataaattattgttttcatctTGTCTTCA
>XM_043244772.1
TTTCGTGACAAATTCATTCACAGACAAAAAGCATGGAACCTGATTTGACAAAATCCATACATTTTCAGTTGAAGCTGACCGTTTACTAAGTTATTTATCATATGTATTAAAGAAATCGCATGCAGGAATTCCACATTGAATTGTTCAGACACCCAGACCATAACAAAGCTCGTCCTATTTAAATGAAGTCTATGTGCTTTCCCTTCCAGCTCACACATTGCGGAGGAGTAgcgtgtatgtgtataaatcaTGCTAAACTGAGGGCAATAGTGCACTGCAGCTCGAGCCAGACTCTTATTCATCCTTTATAtctcaacacacacatacacaaaacacGCTCTCAGTCTCGGCTTCAATGATTCTCCTTCTCACGGCTTTCTGCGCTCATCCAATCAAGCTCCCTTCGGTGATGTCATCGCTCCCTCTGTGTGTGCGGCGCGCAGTTTTGGGTTTCTCCTAAACTCCCGTTCTCCCACACTCGAGCTCTTTAATCTCTCGGGACGGAGAGAAAGAGGATGAAAAAGGGCGAGCGGACAGATCGAGGGGCTGAGAAGCGGCGACCATGACAACCTATGAAATCCGAGCGGCTGACATCTGCGTCGCTCTCGTCCCTCTCAATCTCCTTCTCTGTTGTTTCTCTGACTCGCATCCAGCAAACAAGCCACAAGCGTTCATTTCATAAGCGACTCCGACGAGTCTGATGACCTCACGCGGCCCTCAGCGTCGTCTTTGATTTCAAACCGCAACGACTGACCACAGCAGAAGTGTGAAGAGTTTTTAAAACATCGAGACCGACTTAGGTCCAACCCCGCCATGACAGGCTCATCATATCACAGCACCCACACACGCACTTCTGACCAACATTTTCCTCCTCTCTGTCGCCTGACTGTTCGAGTCGAGcgtattttcttttgaaagcaTTTCTTGCTTCCTGTCGCTGCACCTCTTGCCACATCCTTTGCTGTACCAAAAGGCTGTCACAGTTGAGACGATCGCATGCATATTTCCTGCGTCTCAACATCTCACGTATCACAAACTGGTAGAGACCTGCTACAACCATGGTGAGCTTCTGTCCTATATGTGGGAAGCCTGTTTATTTTGGTGAGAAGAAGAGGTCATTGGGACGGGATTATCATCCGTTGTGCTTGAAGTGTCACAGGTGTAAAAGACAGCTAACGGCTGGCCAGCATGCAGAGCACGATGAGAAGCCATACTGCACTAACTGCTACATGAGAGATTTTGGTCCCAGAGGTAGCCGAAAACCCGTCGCCCGGACCTCTAACACAGCGGCTTCTTAAGAGGGGTCTTGCAGTCttgaaaaacacacagcatcTGGAtctacaaacaacaataaaactacAGTATACGTTTTACACTGCCACACACAGCAAACCACTGTTAGATACCGCCAAGTTGATCTCTCCTTACCACAGAATAAAACACGACTCCACCCTTACGACTCATAAAAATAACCAGAACCTGCCAAAACATCGGCCGTCCACGTTGGCAGTTTTTCAGGGAAATGAGCTACTTCGTGTgttgaaatcttttaaaatctaAGAAATCGTTTGCTTTAATCTCACCGTTAATGTTGTACAGAGTTTTTCGATTGAGTTGTATTTTATGCTTTAGAATGGGAGACGTGAAATTATAACTATAGTGAATTGAATGTTGGTGTAGAAGGCAGCTATACAagtattgtgtgtttttgttttcaagaCTTCTGTATAccattaattaattgattaactTGAAACactgtgggatttttttttttgtctgctttattattgtttgttcttTTCCGGGATTTTGTGGATCAGAGGCAATAAAACAAAGAGTTTTTCGCGAGGCAGCAAATGTATCTACAAAGCGAAAAAGACAATAATTAATCATTGTGTCTTTTTAATTAGAAGCAGAAGCTCGTGTCCCAAACCTCATGGTGCATAAGTGATGGcttcatcatttttttgttaattcagGAAGAATACATATTTGATTTTAcgattttatctgtttttttcttattagttGATTGAAAGGAAGTGTCACTCAGAGAGCTGCCAGTTAGCGTATTGTTAACACATTGAATAAGAAGAATAATTTAATGTCTCTTATCCTCAAATccataaaataaactgtaaaaaattataatacaataattattatgaattttatGGAACACTTTTTTCTCTGttgaaaactgcatttatataattgaaGATTTATACCTCAAAGTGTAACTGCCTACAATTGgaatataaattattgttttcatctTGTCTTCA

Function

symbol description
zgc:195282 Predicted to enable zinc ion binding activity. Predicted to be involved in intrinsic apoptotic signaling pathway in response to DNA damage and regulation of gene expression.

NR:

description
PREDICTED: cysteine-rich protein 1-like isoform X2

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3709 False 1312 lncRNA 0.38 4 11407608 11410780
TU3710 False 1266 lncRNA 0.48 4 11407608 11410734
TU3711 False 1355 lncRNA 0.37 4 11407565 11410780
XM_043244772.1 True 2288 mRNA 0.41 4 11407565 11411713

Neighbor

gene id symbol gene type direction distance location
pgm2 pgm2,LOC107551595,LOC107591526,LOC107746017 coding downstream 13739 11383791 ~ 11393826 (-)
tbc1d1 tbc1d1,LOC107754138,LOC107656363,LOC107702353,LOC107746016 coding downstream 25208 11336559 ~ 11382357 (-)
klf3 klf12,LOC107565970,LOC107656370,LOC107754179,LOC107702350,LOC107746019 coding downstream 83227 11310593 ~ 11324338 (-)
fam114a1 LOC107754137,LOC107656378,LOC107702351,LOC107746018,LOC107591522 coding downstream 97443 11302481 ~ 11310122 (-)
LOC122347963 msmo1,LOC107655978,LOC107745062,LOC107548349,LOC107750426,LOC107591587,LOC107702386 coding downstream 421546 10982094 ~ 10986019 (-)
phox2ba LOC107551569,LOC107754147,LOC107656929 coding upstream 78239 11489952 ~ 11492033 (-)
trnai-aau NA coding upstream 86572 11498285 ~ 11498358 (-)
rbm47 rbm47,LOC107656158,LOC107754149,LOC107702361,LOC107746010 coding upstream 196848 11608561 ~ 11631643 (-)
lap3 lap3,LOC107754151,LOC107656223,LOC107551587,LOC107746009,LOC107702362,LOC107591534 coding upstream 224447 11636160 ~ 11642208 (-)
kitb kitb,LOC107754153,LOC107656054,LOC107746005,LOC107702363,LOC107591536 coding upstream 243191 11654904 ~ 11666734 (-)
G2532 NA non-coding downstream 208757 11198578 ~ 11198808 (-)
LOC122347981 NA non-coding downstream 400661 11004773 ~ 11006904 (-)
G2391 NA non-coding downstream 408480 10998334 ~ 10999085 (-)
G2381 cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458 non-coding downstream 541517 10861565 ~ 10866048 (-)
G2377 NA non-coding downstream 568263 10837968 ~ 10839302 (-)
G2630 NA non-coding upstream 300260 11711973 ~ 11712523 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding upstream 301731 11713444 ~ 11715227 (-)
G2632 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107754157,LOC107591540,LOC107702368,LOC107750413 non-coding upstream 304420 11716133 ~ 11716935 (-)
G2634 fbxo10,LOC107754157,LOC107656048,LOC107702368,LOC107591540,LOC107750413,LOC101884743 non-coding upstream 308015 11719728 ~ 11720175 (-)
G2635 fbxo10,LOC107656048,LOC107754157,LOC107702368,LOC107591540 non-coding upstream 308588 11720301 ~ 11721030 (-)
LOC122343263 NA other downstream 10989 11395734 ~ 11396576 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other downstream 114517 11242031 ~ 11293048 (-)
G2401 NA other downstream 353624 11053154 ~ 11053941 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other downstream 426199 10953875 ~ 10981366 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other downstream 593490 10806569 ~ 10814075 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other upstream 98726 11510439 ~ 11512833 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other upstream 102438 11514151 ~ 11580717 (-)
apela NA other upstream 371916 11783629 ~ 11788666 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other upstream 686197 12097910 ~ 12117383 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other upstream 926249 12337962 ~ 12366108 (-)

Expression


Co-expression Network