G2391


Basic Information

Item Value
gene id G2391
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 10998334 ~ 10999085 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3488
CGCCGAAGGAGCGTGTCAGTCTTTCCTTCactcttgtttttgtgtgtgagctGTGTCGTTTGAGTCTCTGGATGTGTCCTGTCCTCACCCACACAACGGACCTGTCTGCCGCTCGGTATCCGGTCGCGTCAGTCAAACCGACACCGACAGCGAGGCCGCGGTTCTCTTTTATATTCATCAGCGGAGCTGGACCCGCGCACCAGGACCCAGTCCAGCCCGGCTCGGCTCGGTTCGGTGGACGGGACACAGCGGGGATTTAAACGACAGAGCCCGACCAGAGATGGAGAAACGCAGACTGATGTGAACGGAACCAGCGCTATGGAGATACATCCACTATGCACTAAGCTTTGTCATCATAAAGCTGTGGAGCTGAaggatgatgtgtgtgagaaacagagTGCGGTCACCATCAATCCACGTCACATGAGGAAGGCTTTCCGGATCATGAATGAGctcg

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0048468 cell development biological_process
GO:0022607 cellular component assembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3488 True 457 lncRNA 0.46 2 10998334 10999085

Neighbor

gene id symbol gene type direction distance location
LOC122347963 msmo1,LOC107655978,LOC107745062,LOC107548349,LOC107750426,LOC107591587,LOC107702386 coding downstream 12315 10982094 ~ 10986019 (-)
LOC122347847 kdm4c,LOC107655842,LOC107709452,LOC107548355,LOC107750465,LOC107570226 coding downstream 192203 10800296 ~ 10806131 (-)
sorbs2a sorbs2a,sorbs2,LOC107746024,LOC107562741,LOC107754131,LOC107702341,LOC107656785 coding downstream 526387 10425765 ~ 10471947 (-)
pdlim3a pdlim3,pdlim3a,LOC107754177,LOC107656980,LOC107746050,LOC107702342 coding downstream 574793 10418632 ~ 10423541 (-)
si:dkey-256e7.8 LOC107577660,LOC107754169,LOC107656796 coding downstream 580768 10416760 ~ 10417566 (-)
fam114a1 LOC107754137,LOC107656378,LOC107702351,LOC107746018,LOC107591522 coding upstream 303396 11302481 ~ 11310122 (-)
klf3 klf12,LOC107565970,LOC107656370,LOC107754179,LOC107702350,LOC107746019 coding upstream 311508 11310593 ~ 11324338 (-)
tbc1d1 tbc1d1,LOC107754138,LOC107656363,LOC107702353,LOC107746016 coding upstream 337474 11336559 ~ 11382357 (-)
pgm2 pgm2,LOC107551595,LOC107591526,LOC107746017 coding upstream 384706 11383791 ~ 11393826 (-)
phox2ba LOC107551569,LOC107754147,LOC107656929 coding upstream 490867 11489952 ~ 11492033 (-)
G2381 cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458 non-coding downstream 132286 10861565 ~ 10866048 (-)
G2377 NA non-coding downstream 159032 10837968 ~ 10839302 (-)
G2374 NA non-coding downstream 171555 10826542 ~ 10826779 (-)
G2369 NA non-coding downstream 172582 10824795 ~ 10825752 (-)
G2328 NA non-coding downstream 319317 10678810 ~ 10679017 (-)
LOC122347981 NA non-coding upstream 5688 11004773 ~ 11006904 (-)
G2532 NA non-coding upstream 199493 11198578 ~ 11198808 (-)
G2630 NA non-coding upstream 712888 11711973 ~ 11712523 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding upstream 714359 11713444 ~ 11715227 (-)
G2632 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107754157,LOC107591540,LOC107702368,LOC107750413 non-coding upstream 717048 11716133 ~ 11716935 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other downstream 16968 10953875 ~ 10981366 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other downstream 184259 10806569 ~ 10814075 (-)
LOC122347930 dnah6,LOC106610484 other downstream 198725 10734970 ~ 10799609 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other downstream 596648 10357181 ~ 10401686 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other downstream 2199979 8779212 ~ 8798355 (-)
G2401 NA other upstream 54069 11053154 ~ 11053941 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other upstream 242946 11242031 ~ 11293048 (-)
LOC122343263 NA other upstream 396649 11395734 ~ 11396576 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other upstream 408480 11407565 ~ 11411713 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other upstream 511354 11510439 ~ 11512833 (-)

Expression


Co-expression Network