G2401


Basic Information

Item Value
gene id G2401
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11053154 ~ 11053941 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3498
gtcaccctggctcttcggctctccgtctccacctcggtctcctcctccacctgctccgccaccgtcggtcggccccatggagtcgatggctgctcctcctccatggctcctccctccgtcggctccaccttggaccaccatagctgggctctggatctcctcctgctccggactcctcctgtctccttcctggctcctccctccgtcggccccaccgtggaccaccatagctgggctctggatctcctcctgctccggactcctcctgtctcctccctggctcctccctccgtctacacctccttggacccttctgccttctgcctgcccactcctggggatccgtcctccaccacaacctcctcccaagacccggtatccccaaatcttagtcattttggtttttgtttgtttttgtttgttaccctttaggtgcgaggacgcaccttccgggaggggggggtaatgtcacatctctggactctttgtttgtttttgtcccgtgccatgtgctccctgtgccctgccttccctccgtgttaattatgttattgtcatcagctgtgtctcgtcaattaccctgtgtatttaagtcctgtgttttgagttctgttggtccgagcgtcgaggtccttacctgatgtctttacgtgtgtttatcctgcctgcctgttctacctgcctgcctgcctgcctttatatctttattttgtcattcttgagattaaatccatttaagtttattttgagccTCGTCTCCTCAGTCTCtcgaaagcgcaaccgtgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3498 True 788 TUCP 0.55 1 11053154 11053941

Neighbor

gene id symbol gene type direction distance location
LOC122347963 msmo1,LOC107655978,LOC107745062,LOC107548349,LOC107750426,LOC107591587,LOC107702386 coding downstream 67135 10982094 ~ 10986019 (-)
LOC122347847 kdm4c,LOC107655842,LOC107709452,LOC107548355,LOC107750465,LOC107570226 coding downstream 247023 10800296 ~ 10806131 (-)
sorbs2a sorbs2a,sorbs2,LOC107746024,LOC107562741,LOC107754131,LOC107702341,LOC107656785 coding downstream 581207 10425765 ~ 10471947 (-)
pdlim3a pdlim3,pdlim3a,LOC107754177,LOC107656980,LOC107746050,LOC107702342 coding downstream 629613 10418632 ~ 10423541 (-)
si:dkey-256e7.8 LOC107577660,LOC107754169,LOC107656796 coding downstream 635588 10416760 ~ 10417566 (-)
fam114a1 LOC107754137,LOC107656378,LOC107702351,LOC107746018,LOC107591522 coding upstream 248540 11302481 ~ 11310122 (-)
klf3 klf12,LOC107565970,LOC107656370,LOC107754179,LOC107702350,LOC107746019 coding upstream 256652 11310593 ~ 11324338 (-)
tbc1d1 tbc1d1,LOC107754138,LOC107656363,LOC107702353,LOC107746016 coding upstream 282618 11336559 ~ 11382357 (-)
pgm2 pgm2,LOC107551595,LOC107591526,LOC107746017 coding upstream 329850 11383791 ~ 11393826 (-)
phox2ba LOC107551569,LOC107754147,LOC107656929 coding upstream 436011 11489952 ~ 11492033 (-)
LOC122347981 NA non-coding downstream 46250 11004773 ~ 11006904 (-)
G2391 NA non-coding downstream 54069 10998334 ~ 10999085 (-)
G2381 cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458 non-coding downstream 187106 10861565 ~ 10866048 (-)
G2377 NA non-coding downstream 213852 10837968 ~ 10839302 (-)
G2374 NA non-coding downstream 226375 10826542 ~ 10826779 (-)
G2532 NA non-coding upstream 144637 11198578 ~ 11198808 (-)
G2630 NA non-coding upstream 658032 11711973 ~ 11712523 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding upstream 659503 11713444 ~ 11715227 (-)
G2632 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107754157,LOC107591540,LOC107702368,LOC107750413 non-coding upstream 662192 11716133 ~ 11716935 (-)
G2634 fbxo10,LOC107754157,LOC107656048,LOC107702368,LOC107591540,LOC107750413,LOC101884743 non-coding upstream 665787 11719728 ~ 11720175 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other downstream 71788 10953875 ~ 10981366 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other downstream 239079 10806569 ~ 10814075 (-)
LOC122347930 dnah6,LOC106610484 other downstream 253545 10734970 ~ 10799609 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other downstream 651468 10357181 ~ 10401686 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other downstream 2254799 8779212 ~ 8798355 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other upstream 188090 11242031 ~ 11293048 (-)
LOC122343263 NA other upstream 341793 11395734 ~ 11396576 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other upstream 353624 11407565 ~ 11411713 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other upstream 456498 11510439 ~ 11512833 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other upstream 460210 11514151 ~ 11580717 (-)

Expression


Co-expression Network