G2381 (cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458)


Basic Information

Item Value
gene id G2381
gene name cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 10861565 ~ 10866048 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3476
aacagACTGACAACAGAAAGGGAAGTTTATTTTGGTTGCAAATTGGATCATTCAGTTAAACCATTATTACATTCATATACAAGACATACCACTTAAGTCTCAAAGGAGAAATACATAAGCTGAATTGAAATGCCATTTTATGACATTAATATTGTGTCTAATTCAGATGTGCATGAAATTTCCAAAATCAGAGGGTTAACATTTGGATCAATGATAAATTCAGTATGTAGGATTATAGATTTTATCATAATGTTGATTGATTTAGCAGTAACATGTGCCATTTCATATTACAGAAGTAcactaattataaatatactgaaacagacaaaaaaaaaaaaaaagacaatatataACAGAATGTTTAATAAAGACTGCAGATAGTACTTTATCTGGCACAATTGTGCATTTTGGTATAGATTACAAAACCATCGGATCTAAATAAGCTTTCTTTGTGTAGTTTGTGCCATTAAAATCTGCTGTTATATGATCTGAAATGAAACTCTCTGCTTTACAAACATAGATAAAACAGATTTATAGCTATCATCTATcatatgtttataattatttaatttcctaAATAGTTCTTATAACATACGGTTAGGAGTTCAGTTGATAACCTcttccattttcttttcatctgaaCAGTTGTCTGGCTATGATATTCGGcgtaataattattaaagcatttgtaaatgaaaCAGGTTTATCAAAAGCACTCCCATTCAATACACCAAgcataacattatttaaaaccaCAGGACAGTGTTTGAACAGAAAGAGACTTGTGATTAGGTGTAAATGAGTGCTGTCTACATTGGCTTCAGTCGTAATCAGTCACGATCagaataaatagtaatattcattgctgACATGTACATTCATCACAACACAGTGCTCTCTGATTGGTTGGCGTGATTGGTGACCATAGCTACAAAATAATCTCACAATATCAATGTAAAACACAACATTACAAAAGAGTAATAGATCGGCCTCCACAATATCAACGTTCTGGGTTATCCGTGAATCTTTTTCTGTCAGTATATGTAATAACCTTTGCATGCCTGCAGGAAACACAGGCAGATGATGCACAATGCTCCAAAATAACACGGACTAGGTCGATCGAAATCGCAAAAACAGTGCAATAGGATCAACTTTACATTAGGGGCACTTCACCAAAACCTACGTAGCGTTTCATTTAGCGGCAATACACGTATTCATCCATATTTATAAGGACAACCATATACGCGAATAGTTTAACGCCGGTTGTCTTTGTTAACACGTATGAATGGCTCATGCACATATGGCTGTTGTAAATATGTTCGGATGCAGTGCCTCTAACGTAAGAcaatcaaaacaaagcaaaaaaacggaattgtgttattttaagttgatGAGCACACACATAcgacaacaataaatatattacaccCATAATGCTTGCGACGGCGTCTGCCTCAGGCCAGTTAGAAGTTGAGCGTCTCTGACATCATCTTCCACCAATCCATGAGCTCCTCCTTCTCTTCctccttcctctcctccagcgACTCCAGCTCAAAATCACCCGTGTAGAAGGGCTGTGGGGAACGGCTACTTTCTTGACCACGGTGAGGTACCCAGGAGCAGATGCTGACACTTTGTAATTACCGGGAGCCAACAAACGCCAGTAATCGCCATCCTtggctGGTCATATCGTGGTCAATTCCTTCAACAGAAATAGAAGCGTTTGAGATGGGGTTCCCCTGGAGATCACGAACAAATCCCGCCACTCCTCTGTGAACCTGTGAAGGACATGAGGGATCAAAACTATCCCCTTCTAATCCTGACTCATGAGTCTGAGCTTTACAGGAAACAAAACAACTCACCCTCGCTGTCAGCATTTccaaatgaaaagtaaatattaGAAAGCAAAAGATTCGGGCATACCTGCTCTATGTAGTTGACCAGCGAGTTGCGGTTCTGGTCCCAGTACTGCTTGAGCGTGTCCTCAGGAGGAAACTTATCACAGCTCAGCTCCAGAGTGATCTCAAAACAATTGCTGCTCAGATAGTTGAAGTCCTGCATacctgacagagagagagagaaagagcaaggAAAAGATCAAAGGTGTGCTACTgttgttaaagggatagctcaccttCATTTGGGCCACATGGATGGTTGGACGGATGGATTGAAGTCAATGTGGACTAGCAACTGAActtgaaccgtccctttaagtggcctttttcttttaacatgCTACGTGGTGAAAGTACTGTATGTGTACACTCATGagcttattttgcatttaatttcaaaaccatCTGCATTAATCCCCTCCTATGCTGCTTCCACTTTTCCAGGAAAGCATTCCACTAAATGTTGGAACACGGCTGTGGGGATTTGAAAGAACATCAGTGAGGACAGGAATCAGTGTTGGGTGAAGCCTGCAATTTATCTCAAAGATGTTGTCAAGCCCTCCCCAGGCTGCTGCCACAAATTTGGAAGTGCACAATTCTCCAAATGTGATTACCAGCTTCAGGAGAATGAATTCCCATGCCTTCTTCATAACATTTCtatgtatttgttgtttgttttgaatcTGGTATTAAACCTTCTGCTTTTAGCCTTTATAAAAagatgtatgtatatgtatgtcatCTGCCTTAGTTTAGTTCCTCTGTGCCTATATTTGGTTGTTCCTGcccttttttgtctttattagttaattagttccCAATTCTGTCTGTTCACCAGTTTTAGTTTTCCCTGATTGTTTCCATGTCTCTATATACATTCAGTTTACCTTTGTCCGTGGATAATTAAATTCTATAAGTTCTGTAACTAAGTTCGAACCTTCATTCCACACCTCAACTGTGACATGTATTAATCATTTGGATAATTTAGATTACATAGAATGTATAATAAACAATTTAGAAAATTTGCaatgaaatattcaatattttgcaCTATTTCTAGATCGCTAATCagttaagaaaaataagtgGCATTGACAATATAAACTCCTTTGTACAGATATACATTATGCTGTGCAACATACTAACACcaataacaaaaaatgattaCGTTTCTAATAAATCAATGTAGAAcacaattattacaatatattagtGATTTGAGGAAGCTGTGCATTATACCTCCAGGAACACTGTACCAGGCCCCTCCATTAGTGATGCCCTCCTTGAAGCTGGAGTCATCATCATTCTTGCGGCATGGCGGCCGGTTTGGGTCAGACATCACTGGGTTATAGCTGGAGTAGGCCTTAGCCAGAGACTTAAATACCAGATCATCTGGACTAGCACTATATTCATGGGTAGAACCTGATGGACAAACAGAGAAATTGTATGAAgcgttttctttgtttttaattct

Function

symbol description
cpe Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space. Is expressed in posterior pancreatic bud and retina. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human CPE (carboxypeptidase E).

NR:

description
PREDICTED: carboxypeptidase E

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3476 True 3372 lncRNA 0.38 3 10861565 10866048

Neighbor

gene id symbol gene type direction distance location
LOC122347847 kdm4c,LOC107655842,LOC107709452,LOC107548355,LOC107750465,LOC107570226 coding downstream 55434 10800296 ~ 10806131 (-)
sorbs2a sorbs2a,sorbs2,LOC107746024,LOC107562741,LOC107754131,LOC107702341,LOC107656785 coding downstream 389618 10425765 ~ 10471947 (-)
pdlim3a pdlim3,pdlim3a,LOC107754177,LOC107656980,LOC107746050,LOC107702342 coding downstream 438024 10418632 ~ 10423541 (-)
si:dkey-256e7.8 LOC107577660,LOC107754169,LOC107656796 coding downstream 443999 10416760 ~ 10417566 (-)
ufsp2 ufsp2,LOC107754127,LOC107656418,LOC107562733,LOC107746025,LOC107702344 coding downstream 445368 10411890 ~ 10416197 (-)
LOC122347963 msmo1,LOC107655978,LOC107745062,LOC107548349,LOC107750426,LOC107591587,LOC107702386 coding upstream 116046 10982094 ~ 10986019 (-)
fam114a1 LOC107754137,LOC107656378,LOC107702351,LOC107746018,LOC107591522 coding upstream 436433 11302481 ~ 11310122 (-)
klf3 klf12,LOC107565970,LOC107656370,LOC107754179,LOC107702350,LOC107746019 coding upstream 444545 11310593 ~ 11324338 (-)
tbc1d1 tbc1d1,LOC107754138,LOC107656363,LOC107702353,LOC107746016 coding upstream 470511 11336559 ~ 11382357 (-)
pgm2 pgm2,LOC107551595,LOC107591526,LOC107746017 coding upstream 517743 11383791 ~ 11393826 (-)
G2377 NA non-coding downstream 22263 10837968 ~ 10839302 (-)
G2374 NA non-coding downstream 34786 10826542 ~ 10826779 (-)
G2369 NA non-coding downstream 35813 10824795 ~ 10825752 (-)
G2328 NA non-coding downstream 182548 10678810 ~ 10679017 (-)
G2327 NA non-coding downstream 183043 10678175 ~ 10678522 (-)
G2391 NA non-coding upstream 132286 10998334 ~ 10999085 (-)
LOC122347981 NA non-coding upstream 138725 11004773 ~ 11006904 (-)
G2532 NA non-coding upstream 332530 11198578 ~ 11198808 (-)
G2630 NA non-coding upstream 845925 11711973 ~ 11712523 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding upstream 847396 11713444 ~ 11715227 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other downstream 47490 10806569 ~ 10814075 (-)
LOC122347930 dnah6,LOC106610484 other downstream 61956 10734970 ~ 10799609 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other downstream 459879 10357181 ~ 10401686 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other downstream 2063210 8779212 ~ 8798355 (-)
G1926 NA other downstream 2253770 8556040 ~ 8607795 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other upstream 87827 10953875 ~ 10981366 (-)
G2401 NA other upstream 187106 11053154 ~ 11053941 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other upstream 375983 11242031 ~ 11293048 (-)
LOC122343263 NA other upstream 529686 11395734 ~ 11396576 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other upstream 541517 11407565 ~ 11411713 (-)

Expression


Co-expression Network