G2382 (cpe,LOC107591555,LOC107745061,LOC107548348)


Basic Information

Item Value
gene id G2382
gene name cpe,LOC107591555,LOC107745061,LOC107548348
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 10953875 ~ 10981366 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3478
ACAGGTAGTCAGGACTCGCGCTCACGCGTCAGTTCTGCGGTTCGTACGGGACACGACACGGAAAACCAGAGAGACAGACGCGCAGGAGAGAAACGAGAGAAAGACCGACAGCGGCGCTAAGAGAGACGAGACGGGAGCGATGACGGCGGCGGTGTTTTGCGGGGCTCTGCTGATGCTGTCCCTGGCCTCAGGCGGGGATGCTGCGGGGGAAGGAGGCATCTCCTTCGAGTACCACCGGTATGAGGAGATGCGGAAAGCGCTGGTGTCCGTCTGGCTCCAGTGCCCCTCCATCACCCGCATCTACACGGTGGGCGAGAGTTACGAGGGCCGAGAGCTGCTCGTGCTGGAGATGAGCGACAACCCCGGGGTCCACGAGCCTGGTGAGCCAGAGTTTAAGTACATCGGGAACATGCACGGCAATGAGGCTGTGGGCAGAGAGCTTCTCATCTATCTGGCTCAGTATCTCTGTAATGAGTACCAGGAGGGCAACGACACCATCATCGACCTGATCCACTCCACGCGCATTCACATCATGCCCTCCATGAATCCTGACGGCTTCGAGAAAGCAGCCTcacagTCTGGTGAGATGAAGGACTGGTTTGTGGGCCGCAGCAACGCTCAgggaggagcCAACAACCATCTTCTGATAAACATGAAGAAAGCTGTGGATGAAAACACCAAG

Function

symbol description
cpe Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space. Is expressed in posterior pancreatic bud and retina. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human CPE (carboxypeptidase E).

NR:

description
PREDICTED: carboxypeptidase E-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3478 True 682 TUCP 0.37 4 10953875 10981366

Neighbor

gene id symbol gene type direction distance location
LOC122347847 kdm4c,LOC107655842,LOC107709452,LOC107548355,LOC107750465,LOC107570226 coding downstream 147744 10800296 ~ 10806131 (-)
sorbs2a sorbs2a,sorbs2,LOC107746024,LOC107562741,LOC107754131,LOC107702341,LOC107656785 coding downstream 481928 10425765 ~ 10471947 (-)
pdlim3a pdlim3,pdlim3a,LOC107754177,LOC107656980,LOC107746050,LOC107702342 coding downstream 530334 10418632 ~ 10423541 (-)
si:dkey-256e7.8 LOC107577660,LOC107754169,LOC107656796 coding downstream 536309 10416760 ~ 10417566 (-)
ufsp2 ufsp2,LOC107754127,LOC107656418,LOC107562733,LOC107746025,LOC107702344 coding downstream 537678 10411890 ~ 10416197 (-)
LOC122347963 msmo1,LOC107655978,LOC107745062,LOC107548349,LOC107750426,LOC107591587,LOC107702386 coding upstream 728 10982094 ~ 10986019 (-)
fam114a1 LOC107754137,LOC107656378,LOC107702351,LOC107746018,LOC107591522 coding upstream 321115 11302481 ~ 11310122 (-)
klf3 klf12,LOC107565970,LOC107656370,LOC107754179,LOC107702350,LOC107746019 coding upstream 329227 11310593 ~ 11324338 (-)
tbc1d1 tbc1d1,LOC107754138,LOC107656363,LOC107702353,LOC107746016 coding upstream 355193 11336559 ~ 11382357 (-)
pgm2 pgm2,LOC107551595,LOC107591526,LOC107746017 coding upstream 402425 11383791 ~ 11393826 (-)
G2381 cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458 non-coding downstream 87827 10861565 ~ 10866048 (-)
G2377 NA non-coding downstream 114573 10837968 ~ 10839302 (-)
G2374 NA non-coding downstream 127096 10826542 ~ 10826779 (-)
G2369 NA non-coding downstream 128123 10824795 ~ 10825752 (-)
G2328 NA non-coding downstream 274858 10678810 ~ 10679017 (-)
G2391 NA non-coding upstream 16968 10998334 ~ 10999085 (-)
LOC122347981 NA non-coding upstream 23407 11004773 ~ 11006904 (-)
G2532 NA non-coding upstream 217212 11198578 ~ 11198808 (-)
G2630 NA non-coding upstream 730607 11711973 ~ 11712523 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding upstream 732078 11713444 ~ 11715227 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other downstream 139800 10806569 ~ 10814075 (-)
LOC122347930 dnah6,LOC106610484 other downstream 154266 10734970 ~ 10799609 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other downstream 552189 10357181 ~ 10401686 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other downstream 2155520 8779212 ~ 8798355 (-)
G1926 NA other downstream 2346080 8556040 ~ 8607795 (-)
G2401 NA other upstream 71788 11053154 ~ 11053941 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other upstream 260665 11242031 ~ 11293048 (-)
LOC122343263 NA other upstream 414368 11395734 ~ 11396576 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other upstream 426199 11407565 ~ 11411713 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other upstream 529073 11510439 ~ 11512833 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G412056 NA non-coding CI01000300 null 7717584 ~ 7806082 (+)