kitb (kitb,LOC107754153,LOC107656054,LOC107746005,LOC107702363,LOC107591536)


Basic Information

Item Value
gene id kitb
gene name kitb,LOC107754153,LOC107656054,LOC107746005,LOC107702363,LOC107591536
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11654904 ~ 11666734 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235301.1
agagagagagagagagagtgtgtcagTTGTGTATGAGAGTCCTACTAATGTACAGACACACGAACACAGACTGACGGAATGGGGCACATTTGGTTTTTATGTACAGTTCTACTTTTATTCGCCATACCTGGAGGGTGGTTTGAACCTGTTATCACTCCCAATGCCACTCATCTGGTGATACCAATAGGTGGACAACTGCAAATCAGCTGTCATGACGATGCAGAGGCGAGCAAGGTGCAATGGATGCGGGAAAAAGGTCGGAAAATTGATGGAGGGCTAGAGAAAGATGGAGCTCGTATCATCCACCTCACCTCTACACAGGTACAGCACATGGGCCGCTACACCTGTAAAAACACTCAAACAGAAGAGAAGAGCTCCATCTACATCTATGTGAAAGATTTAGAGAACCCTTTTGTGCGGCCCGTGGTAGGTGGCCTTTTGGTGAGGGAAGGAGAGGATGGCACCCTTCCTTGTTTAGTAACAGATCCAGCCGTCGGTCATCTGTCTCTTCTGACCTGCGGTGGCTCTGGTCTCCCAGCAAGCCTCACCTTCAGTGCTCATCCTCAGAGAGGGATCACCATCAAAAACGTCTCCAGAGCTTTTGAGGGCTGCTACATTTGTGCGGGAGAGATGAATGAAAAACTTGTGAAATCAAGCCAGTATAACTTGGTTGTGCTGCCAGTCCCGGAGGCGGAGCCATCGATCAGCCTATCCAGAATCGAAAATGTGATTTTGATCCAGGGTCAGGAGTTTGTGCTCAACTGTAGCACCATCAACAGCAACTTTGATATCAGCCTGAGCTGGAGTATCCCTTCTGAAACGATTGCAGAGAAAAGCCAAAAATCAAACATCTTGCCGGGTTCTCGAGAATATCAGCGCTCAGTAGGACTGCACATCAAATCTGTGAAGATGAATGACTCAGGAGTTTATCGCTGTATTGCGAGGAATGAGAAAGGTGTCTCCATGGCAACTGTCAATCTGGAGGTTTACGAGCATGGTTTCATTAACCTTACGGAGCGAGAGGACAGGGTGGTGGAGGTGAGGGAGGGAGAAAGCCTGACCCTTAGCGTGGAGATGACTTCATACCCCAGTCCCATCGAAGTCTACTGGATGTATAACAATCAACAGCTCAAAAACACATCTGAACACGTCATTACACTGCACAACCAGCAGtacagGTACGTCAGTGAACTGAGGCTGGTTCGAGTTCATGGATCAGAGGGCGGGATCTACACAttctcagccaatcacagatATGCATCTGTCAATCAGTCATTCACTGTCCATGTTATATGTAAACCCGTGATAGTTTCCCAGGAGGGGCCAGTTGATGGACAGGTGCGGTGCGTCGCTTCAGGATATCCTGTCCCAAAAATATCTTGGTATTACTGTGAGCCACCACATACACGGTGCTCACATCTGTTGAATGCGACACTGGCAGATGAGGAGTTTGCAGTGGTCAAAGTGTCAGGGGCAGAATTCGGACGAAGCGAGGTGGATAGTCGACTTAATGTCAGCAAAGGAAAATTTCACACACTTGAGTGTGTGGCAACAACCCAGGGAGAGCAGGCGTACACCCTCTTTTCCATCAGCGAGAGAACAGTGCCTCATAAACTCTTCACCCCTCTGCTCTCTGGAGTCGTGTCTACTTCTGTTCTGCTCAGCTTCTTTCTGGTGGTTCTGCTCTACAAATACATGCAGAAACCCAAATATGAGATCCACTGGAAGGTGATCGAAAGTTTTGATGGCAACAATTATACCTACATAGACCCAACGCAGCTGCCTTATGACCCCAAATGGGAGTTTCCAAGGGAGAGACTGCGTTTTGGTAAAGTCCTCGGCTCTGGAGCATTTGGTAAAGTGGTGGCAGCTACAGCATATGGACTTTGCTCAGCAGACACAGTGACCACTGTAgctgtaaaaatgctaaaacCGAGTGCTCACTCCACTGAGAAAGAGGCTCTAATGTCGGAGTTAAAGGTTCTGAGCTACATCGGCAATCATATAAATATTGTCAACTTGCTTGGTGCCTGTACAGTCGGAGGCCCCATTCTGGTGATCACAGAATACTGTTGCTATGGCGACCTATTGAACTTTCTAAGAAGAAAGCGGGATGCATTTTTCAGTTCCAAAACAGGCGATGGATATTACAAAAATCTGCTCAGCCAAACACAGCCTTCAAGaGAGGGCACTGATAATGGATACATGCCCATGAGGTCGTATCAGAAGAGGTCGACTCAGACAGGTACGTGCATCTCAAAAGAATGCAAGCAACATCCGTTATCGTACACTTTTCATTCTGTATCATCTCTCTCAGAATGGTGCGATGACAAAGATGATCTCTCTTTGGATACTGAGGACTTACTCAGCTTCTCATATCAAGTGGCTAAAGGCATGGACTTCCTCACTTCTAAAAATTGTATTCACAGAGATCTGGCTGCCAGGAATGTATTACTGACTCAGGGTCGGGTAGCAAAGATATGTGATTTCGGTTTGGCACGTGACATCACAAGAGATTCCAGCTACGTCCTGAGAGGAAATGCACGCTTACCAGTTAAATGGATGTCCCCAGAGAGCCTGTTTGCTTGTGTGTACACTTTTGAGAGTGATGTCTGGTCCTACGGCATTCTGTTGTGGGAGATCTTCTCTCTGGGTAACACGCCATATCCGGGTATTCCAGTCGGTTCCACATTCTATAAGATGATACAAGATGGATACAGAATGAGTGAACCTGAGTTTGCCCCAATTGAAGTTTATGAGGTAATGAGATGGTGTTGGAGTGCTGACCCTCTGAAGAGACCAACCTTCAAGAAACTGGTGGAAAGGACTGAACTCCTGCTGTCGGAAACCACCAGACATGATTACTTGAATCTCAGCACTAGCAGCAGCTGCAAGGCGTTTGTTCCTCCAGGCCTGCAGAGGGCACAAAGGCTGAGTTCTGTGGGCAGCTCGACAGCCTCAACTCAACCCCTGCTGCAGGCAACAAATGATGTTTTTCTGGAGAATGAAAGCATATAAACGGCATCTCATCTCCTTGTTTTGCCTCGTTTTCTCAGTAGGTTTGACCTAAAAGCCTTATCCTCCATTTAAGTTCTAACTGTAATTGTGGCATTTAAGGGCATCTCCTGCTTTGGCTCAGTGCATCTCCATTAACATCGTCTtccattatatttcaaattactCAAGACGCATGTCATGTAActgttaatgtatttttctaaatgcaGCTGGGCTCCGTTTATATGGTATTGATCTGCATAGTATTTTGAGTGCATGAGCAGCTACCGTGGCCAGGCGAGCATTTAGATATAGAACCTAATGTTACCTCATCAGATAAATGACCAGCTCTACTGATGACATCATTGTGTAGTGACCTGTGATGATGTCGTGTTGTGTATTCTTTTGTCTTTGACCTGAAAGTACGTCTCAACTGAACAGTAAGGTAGGTAAAAAACAAGGTGGTTTCCGGTTTAATGTGTCACTATCTAAAGCACTTAATACCAACGAATGGAGGTTTTCGTTTATGCATTTGTACTATTTTCAGCATGCGATTACTCTCGAGTGAGTGCTATATTGCATTGATGTATCTACGATGAGATCCCCATCTCAGCTTCAAGTTGTACTTACTGGTATAACTGTCATATTTATTAACAACCTAGgatgtgttcatttttttgaccatttttgtTTGAGTTTGGACTTGAAATTTTGAGCTGTTgagaatgtgtatatatatacaagttGTTTGTTGCTGTGTAAAACTGAGATAATCATATTTAGATTGTACATTGCGCCTTTAATAACTGACTATAGGCTCCATTCTTCAAAAGTGGCTAACCTGGCTACATTACCTGGAGTAAGACAAGTATCTGTTCTGAAGCATGCTTAAAAGGTGATAAACATATCTGGAATAATTATCTTATTAATTCTGATACGTTTATGCATTCCAAGTTATTCCAAAAATGAATCCAGCTGACTTAACCACAATTGAAAGATGGAATGTTGGTctcaaaaagaatgaaaatgtttttgaacgtTGACTGTGACAAATACCTGCTATGAGATTTGACTCTGTAAATATGTGAAGTGTCAGCTATTTTTTCAACTTTTAGAGTGTTATGTCTGGAAAAGGCAAGTAGTAAATGCGCCTGTTTTTATACAGAatcattgaaaataaatgaaaagttgtaAAAGA
>XM_043235309.1
agagagagagagagagagtgtgtcagTTGTGTATGAGAGTCCTACTAATGTACAGACACACGAACACAGACTGACGGAATGGGGCACATTTGGTTTTTATGTACAGTTCTACTTTTATTCGCCATACCTGGAGGGTGGTTTGAACCTGTTATCACTCCCAATGCCACTCATCTGGTGATACCAATAGGTGGACAACTGCAAATCAGCTGTCATGACGATGCAGAGGCGAGCAAGGTGCAATGGATGCGGGAAAAAGGTCGGAAAATTGATGGAGGGCTAGAGAAAGATGGAGCTCGTATCATCCACCTCACCTCTACACAGGTACAGCACATGGGCCGCTACACCTGTAAAAACACTCAAACAGAAGAGAAGAGCTCCATCTACATCTATGTGAAAGATTTAGAGAACCCTTTTGTGCGGCCCGTGGTAGGTGGCCTTTTGGTGAGGGAAGGAGAGGATGGCACCCTTCCTTGTTTAGTAACAGATCCAGCCGTCGGTCATCTGTCTCTTCTGACCTGCGGTGGCTCTGGTCTCCCAGCAAGCCTCACCTTCAGTGCTCATCCTCAGAGAGGGATCACCATCAAAAACGTCTCCAGAGCTTTTGAGGGCTGCTACATTTGTGCGGGAGAGATGAATGAAAAACTTGTGAAATCAAGCCAGTATAACTTGGTTGTGCTGCCAGTCCCGGAGGCGGAGCCATCGATCAGCCTATCCAGAATCGAAAATGTGATTTTGATCCAGGGTCAGGAGTTTGTGCTCAACTGTAGCACCATCAACAGCAACTTTGATATCAGCCTGAGCTGGAGTATCCCTTCTGAAACGATTGCAGAGAAAAGCCAAAAATCAAACATCTTGCCGGGTTCTCGAGAATATCAGCGCTCAGTAGGACTGCACATCAAATCTGTGAAGATGAATGACTCAGGAGTTTATCGCTGTATTGCGAGGAATGAGAAAGGTGTCTCCATGGCAACTGTCAATCTGGAGGTTTACGAGCATGGTTTCATTAACCTTACGGAGCGAGAGGACAGGGTGGTGGAGGTGAGGGAGGGAGAAAGCCTGACCCTTAGCGTGGAGATGACTTCATACCCCAGTCCCATCGAAGTCTACTGGATGTATAACAATCAACAGCTCAAAAACACATCTGAACACGTCATTACACTGCACAACCAGCAGtacagGTACGTCAGTGAACTGAGGCTGGTTCGAGTTCATGGATCAGAGGGCGGGATCTACACAttctcagccaatcacagatATGCATCTGTCAATCAGTCATTCACTGTCCATGTTATATGTAAACCCGTGATAGTTTCCCAGGAGGGGCCAGTTGATGGACAGGTGCGGTGCGTCGCTTCAGGATATCCTGTCCCAAAAATATCTTGGTATTACTGTGAGCCACCACATACACGGTGCTCACATCTGTTGAATGCGACACTGGCAGATGAGGAGTTTGCAGTGGTCAAAGTGTCAGGGGCAGAATTCGGACGAAGCGAGGTGGATAGTCGACTTAATGTCAGCAAAGGAAAATTTCACACACTTGAGTGTGTGGCAACAACCCAGGGAGAGCAGGCGTACACCCTCTTTTCCATCAGCGAGAGAACAGTGCCTCATAAACTCTTCACCCCTCTGCTCTCTGGAGTCGTGTCTACTTCTGTTCTGCTCAGCTTCTTTCTGGTGGTTCTGCTCTACAAATACATGCAGAAACCCAAATATGAGATCCACTGGAAGGTGATCGAAAGTTTTGATGGCAACAATTATACCTACATAGACCCAACGCAGCTGCCTTATGACCCCAAATGGGAGTTTCCAAGGGAGAGACTGCGTTTTGGTAAAGTCCTCGGCTCTGGAGCATTTGGTAAAGTGGTGGCAGCTACAGCATATGGACTTTGCTCAGCAGACACAGTGACCACTGTAgctgtaaaaatgctaaaacCGAGTGCTCACTCCACTGAGAAAGAGGCTCTAATGTCGGAGTTAAAGGTTCTGAGCTACATCGGCAATCATATAAATATTGTCAACTTGCTTGGTGCCTGTACAGTCGGAGGCCCCATTCTGGTGATCACAGAATACTGTTGCTATGGCGACCTATTGAACTTTCTAAGAAGAAAGCGGGATGCATTTTTCAGTTCCAAAACAGGCGATGGATATTACAAAAATCTGCTCAGCCAAACACAGCCTTCAAGaGAGGGCACTGATAATGGATACATGCCCATGAGGTCGTATCAGAAGAGGTCGACTCAGACAGAATGGTGCGATGACAAAGATGATCTCTCTTTGGATACTGAGGACTTACTCAGCTTCTCATATCAAGTGGCTAAAGGCATGGACTTCCTCACTTCTAAAAATTGTATTCACAGAGATCTGGCTGCCAGGAATGTATTACTGACTCAGGGTCGGGTAGCAAAGATATGTGATTTCGGTTTGGCACGTGACATCACAAGAGATTCCAGCTACGTCCTGAGAGGAAATGCACGCTTACCAGTTAAATGGATGTCCCCAGAGAGCCTGTTTGCTTGTGTGTACACTTTTGAGAGTGATGTCTGGTCCTACGGCATTCTGTTGTGGGAGATCTTCTCTCTGGGTAACACGCCATATCCGGGTATTCCAGTCGGTTCCACATTCTATAAGATGATACAAGATGGATACAGAATGAGTGAACCTGAGTTTGCCCCAATTGAAGTTTATGAGGTAATGAGATGGTGTTGGAGTGCTGACCCTCTGAAGAGACCAACCTTCAAGAAACTGGTGGAAAGGACTGAACTCCTGCTGTCGGAAACCACCAGACATGATTACTTGAATCTCAGCACTAGCAGCAGCTGCAAGGCGTTTGTTCCTCCAGGCCTGCAGAGGGCACAAAGGCTGAGTTCTGTGGGCAGCTCGACAGCCTCAACTCAACCCCTGCTGCAGGCAACAAATGATGTTTTTCTGGAGAATGAAAGCATATAAACGGCATCTCATCTCCTTGTTTTGCCTCGTTTTCTCAGTAGGTTTGACCTAAAAGCCTTATCCTCCATTTAAGTTCTAACTGTAATTGTGGCATTTAAGGGCATCTCCTGCTTTGGCTCAGTGCATCTCCATTAACATCGTCTtccattatatttcaaattactCAAGACGCATGTCATGTAActgttaatgtatttttctaaatgcaGCTGGGCTCCGTTTATATGGTATTGATCTGCATAGTATTTTGAGTGCATGAGCAGCTACCGTGGCCAGGCGAGCATTTAGATATAGAACCTAATGTTACCTCATCAGATAAATGACCAGCTCTACTGATGACATCATTGTGTAGTGACCTGTGATGATGTCGTGTTGTGTATTCTTTTGTCTTTGACCTGAAAGTACGTCTCAACTGAACAGTAAGGTAGGTAAAAAACAAGGTGGTTTCCGGTTTAATGTGTCACTATCTAAAGCACTTAATACCAACGAATGGAGGTTTTCGTTTATGCATTTGTACTATTTTCAGCATGCGATTACTCTCGAGTGAGTGCTATATTGCATTGATGTATCTACGATGAGATCCCCATCTCAGCTTCAAGTTGTACTTACTGGTATAACTGTCATATTTATTAACAACCTAGgatgtgttcatttttttgaccatttttgtTTGAGTTTGGACTTGAAATTTTGAGCTGTTgagaatgtgtatatatatacaagttGTTTGTTGCTGTGTAAAACTGAGATAATCATATTTAGATTGTACATTGCGCCTTTAATAACTGACTATAGGCTCCATTCTTCAAAAGTGGCTAACCTGGCTACATTACCTGGAGTAAGACAAGTATCTGTTCTGAAGCATGCTTAAAAGGTGATAAACATATCTGGAATAATTATCTTATTAATTCTGATACGTTTATGCATTCCAAGTTATTCCAAAAATGAATCCAGCTGACTTAACCACAATTGAAAGATGGAATGTTGGTctcaaaaagaatgaaaatgtttttgaacgtTGACTGTGACAAATACCTGCTATGAGATTTGACTCTGTAAATATGTGAAGTGTCAGCTATTTTTTCAACTTTTAGAGTGTTATGTCTGGAAAAGGCAAGTAGTAAATGCGCCTGTTTTTATACAGAatcattgaaaataaatgaaaagttgtaAAAGA

Function

symbol description
kitb Predicted to enable transmembrane receptor protein tyrosine kinase activity. Acts upstream of or within embryonic hemopoiesis. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be integral component of plasma membrane. Is expressed in several structures, including gonad; immune system; nervous system; otic vesicle; and ventral mesoderm. Human ortholog(s) of this gene implicated in several diseases, including acute myeloid leukemia; gastrointestinal stromal tumor; germ cell cancer (multiple); piebaldism; and renal cell carcinoma. Orthologous to human KIT (KIT proto-oncogene, receptor tyrosine kinase).

NR:

description
PREDICTED: mast/stem cell growth factor receptor kita-like isoform X2

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004714 transmembrane receptor protein tyrosine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235301.1 True 4195 mRNA 0.44 20 11654904 11666734
XM_043235309.1 False 4123 mRNA 0.44 21 11654904 11666734

Neighbor

gene id symbol gene type direction distance location
lap3 lap3,LOC107754151,LOC107656223,LOC107551587,LOC107746009,LOC107702362,LOC107591534 coding downstream 12696 11636160 ~ 11642208 (-)
rbm47 rbm47,LOC107656158,LOC107754149,LOC107702361,LOC107746010 coding downstream 23261 11608561 ~ 11631643 (-)
trnai-aau NA coding downstream 156546 11498285 ~ 11498358 (-)
phox2ba LOC107551569,LOC107754147,LOC107656929 coding downstream 162871 11489952 ~ 11492033 (-)
pgm2 pgm2,LOC107551595,LOC107591526,LOC107746017 coding downstream 261078 11383791 ~ 11393826 (-)
ecpas kiaa0368,LOC107702367,LOC107551559,LOC107656759 coding upstream 26783 11693517 ~ 11710803 (-)
polr1e polr1e,LOC107754182,LOC107754175 coding upstream 58393 11725127 ~ 11729264 (-)
tma16 tma16,LOC107754160,LOC107551564,LOC107656272 coding upstream 149742 11816476 ~ 11818872 (-)
grhprb grhprb,LOC107702374,LOC107656243,LOC107754183,LOC107591546,LOC108444366 coding upstream 180273 11847007 ~ 11850655 (-)
LOC122351032 LOC107754184,LOC107551556,LOC107656104 coding upstream 244016 11910750 ~ 11918207 (-)
G2532 NA non-coding downstream 456096 11198578 ~ 11198808 (-)
LOC122347981 NA non-coding downstream 648000 11004773 ~ 11006904 (-)
G2391 NA non-coding downstream 655819 10998334 ~ 10999085 (-)
G2381 cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458 non-coding downstream 788856 10861565 ~ 10866048 (-)
G2377 NA non-coding downstream 815602 10837968 ~ 10839302 (-)
G2630 NA non-coding upstream 45239 11711973 ~ 11712523 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding upstream 46710 11713444 ~ 11715227 (-)
G2632 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107754157,LOC107591540,LOC107702368,LOC107750413 non-coding upstream 49399 11716133 ~ 11716935 (-)
G2634 fbxo10,LOC107754157,LOC107656048,LOC107702368,LOC107591540,LOC107750413,LOC101884743 non-coding upstream 52994 11719728 ~ 11720175 (-)
G2635 fbxo10,LOC107656048,LOC107754157,LOC107702368,LOC107591540 non-coding upstream 53567 11720301 ~ 11721030 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 74187 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 142071 11510439 ~ 11512833 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other downstream 243191 11407565 ~ 11411713 (-)
LOC122343263 NA other downstream 258328 11395734 ~ 11396576 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other downstream 361856 11242031 ~ 11293048 (-)
apela NA other upstream 116895 11783629 ~ 11788666 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other upstream 431176 12097910 ~ 12117383 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other upstream 671228 12337962 ~ 12366108 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 1237465 12904199 ~ 12926482 (-)
smim18 NA other upstream 1302359 12969093 ~ 12973012 (-)

Expression


Co-expression Network