CI01000000_10911953_10912619


Basic Information

Item Value
gene id CI01000000_10911953_10912619
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 10910404 ~ 10912619 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_10911953_10912619.mRNA
TCATAAAAAGCCTCTTTTTTAAACTTTAATTCACTGTCATCATTAATAGAATTAAAATAGATTGTTTCAATGATTTCTTCCAGAGAGATGAATTAATGAGGTGATGTGTGTCAACTGTTATGAGTGGTGTCATTCCAGTGAATAATATCTATACATTAGCCATCTGTAAAATTACAGCACTCCCAGAATTACTAGGTTAGTAATTTTGGCTTCAGACTATCAGTATTAAAAAAAGACTACCAGCTCTAAAATGTTTAGTAAGAAATAATTTAAAATGTTTGTTCATAACACTAACTGGGTTTTGGTTAACATATAGGTCTAAACTATGTTACGTTGCTCTGTGAATTCACAATATTTATTGAGGTAAATTATTGTGACATTAATAATGAAATGAAAAATAAAATGATTTGATCACTGTTACCTAAAGTGAAATAAAACAACTTGTTCTAAAAAAACATTATTTCTGTCAGTGTCTTTTTTCAGAGATGACAGTTAAGTGGTCTGACTTGTTCAGTCACATTCTGCTCATAGTGGTTAAAGTTCACAGATTGACGCCTCACATTTAAGGGCAAAAACTGAAGTAGTTTCCTTTAGTCTAACTTTTTTCTCATGGAGAAACAATCTAACTGATTCAACCGCAGCATGTTTAAATCTCATGCAATTACGGATATCACCTTTACTTCATTGTAATTGACCGGGCTTCAACGTCTAATTAAACACTCGATATTTCACAACTACTGCATGGTGAGTAAAAGCTGGCTATTTCCATGACTGTAGTATTTCATCATTTTAAAATAACAGTAACATAAGCGTAACGTTAATTTACAAAACTTATTGTAAAGTGTTACTATATATACAAACACATATGAATATATATATATATATATATATATATATATATATATATATATATACATACATGTATAATGTAGACTCATAAGGTCAAACTAAATTTTATATTAACTTTTATTTCACATTTTTAAATGAGGTTTGCAGCCCTGCTGCCAAAATTTGAGTTTTTTGAGAATTTATTTTTTTCCTCTAACAATAAATTTTAAACATCAACATTTCATAAACAACTACTTTAACTTTTCTACTTTAGTTCTCATAATAAAATCATTGAATTTGTGGCTCTGGTGCTTTTTTAAAGCATTAACAATTACATTTTGTTCTTTAGCAGAACCGTACTCATCAAGATAATTTAAAAAATAAATAAAAAACAAACAAATAAATAAATATTCTATCGCATGTATAGAAGACCTATCATCATTTATCTCATTGTCACCTTATAACACCTAAACTTGAGTAAATGATGAATTCAGCTAAAATGCAATTTGCAAGAACATTCAGATACAGTTGGGCTTTGATTTATCCCATCCTTATATCCTTTCATTCATCAAAACCATACAAAGAACATCATGAAGTGATGGGATCTTATTGCAATTTCCCTTTGAAGACATGACACCATGAGCAATAATCTATCACCACGACAGGATAGATTGATAAATGTTGCATTGCACACCGTTTCTGCAGTATATCTGGATCAATGATGGAGGAGGATCTAGGAAGCCCAGTGGCTAAGATTAAAGAGGAGTCCGGTAGTGTCCTTCTCACTTACTTCCAAGGAGACATCAACAGCATGGTGGATGAACATTTCTCCCGTGCTCTAGATGGACGTGAATCAAGTCAATGGGAAGAACAGTCACAAACCAAGTATCAGCCCATGTTTCCTCCAGAACATCTTCGGCTAGGAACAAGCAGCGAGTCTCAATCAAACCATCATATGTCACCAAATCTCCCAGCAAACAGTGCTGTTCTGTGGTCAGGGGATTCTCGGCAGGGTACGAGTCTCGCTCTGCCCCCCATGACGTACCCCTTGGCTGTTTCCTCTGATGGTTTGATGGTAGCCGAACAACAGTACTCTAATTCTCTGTTAAACTTGCTCCACAATGATCGCGCTGACATGAGCACAGTGATGGTACCCTCCTCCAAACAAGAATTCACGTCTGGATGGACAAAGTATCCTGGATTTTGCGACCAGATGACTTGTGATATCAATCTAAACTCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_10911953_10912619.mRNA True 2069 mRNA 0.34 2 10910404 10912619

Neighbor

gene id symbol gene type direction distance location
CI01000000_10899343_10909936 NA coding upstream 341 10899343 ~ 10910063 (+)
CI01000000_10857057_10861468 FHL1A, FHL1 coding upstream 48039 10856825 ~ 10862365 (+)
CI01000000_10828551_10844940 SLC9A6, SLC9A6A coding upstream 65057 10828346 ~ 10845347 (+)
CI01000000_10827428_10827613 NA coding upstream 82342 10827428 ~ 10828062 (+)
CI01000000_10806668_10820794 INTS6L, DDX26B coding upstream 89326 10804637 ~ 10821078 (+)
CI01000000_10918542_10933419 NA coding downstream 5792 10918411 ~ 10933457 (+)
CI01000000_10938621_10941220 NA coding downstream 25466 10938085 ~ 10941598 (+)
CI01000000_10984317_10995531 TM9S2, TM9SF2 coding downstream 71698 10984317 ~ 10995594 (+)
CI01000000_11075141_11078086 NA coding downstream 162235 11074854 ~ 11078391 (+)
CI01000000_11094594_11098001 NA coding downstream 179978 11091508 ~ 11101215 (+)
G6957 NA non-coding upstream 84612 10824403 ~ 10825792 (+)
G6956 NA non-coding upstream 144108 10743137 ~ 10766296 (+)
G6958 NA non-coding upstream 160197 10747218 ~ 10750207 (+)
G6930 NA non-coding upstream 321757 10585662 ~ 10588647 (+)
G6929 NA non-coding upstream 325734 10584406 ~ 10584670 (+)
G7048 NA non-coding downstream 16512 10929131 ~ 10929332 (+)
G7025 NA non-coding downstream 134405 11047024 ~ 11054585 (+)
G7022 NA non-coding downstream 168913 11081532 ~ 11091287 (+)
G7069 NA non-coding downstream 206554 11119173 ~ 11119379 (+)
G6820 NA other upstream 477386 10427223 ~ 10433018 (+)
G6811 NA other upstream 588725 10204831 ~ 10321679 (+)
G2850 NA other upstream 6183922 4725986 ~ 4726482 (+)
G2774 NA other upstream 6456172 4453778 ~ 4454232 (+)
G579 NA other upstream 9001596 1767917 ~ 1908808 (+)
G7018 NA other downstream 65870 10978489 ~ 10980872 (+)
G7153 NA other downstream 331838 11244457 ~ 11245633 (+)
G7514 NA other downstream 1223903 12136522 ~ 12137008 (+)
G7522 NA other downstream 1265750 12178369 ~ 12179008 (+)
G9201 NA other downstream 3314818 14215024 ~ 14234941 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_007376 si:dkeyp-11e3.1 coding NC_007125.7 CM002898.2 31751260 ~ 31755722 (+)