G1993


Basic Information

Item Value
gene id G1993
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 2979190 ~ 2979861 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU2232
GAGCGTTCTTTGATCGCTTTCTGTATATAATTTACGCAGAGTTTAAATAACTTTTTATTTAACTCTGATTATTTTTATCCTACTAAGAGAAACAATGTGAAGTTGACCGTTTAGTCACTGGTTTGATTTACTGACACATAGACATAGAACATCTGACTTACATGAATCATTAATATCAGAAATCATTGGTCAAAGATCAGGCATTAGAATTAAGTTACTCACATGTTGTCACATTGCTGTCAAGTCCATCGTAAAAGTCTGTTTGTAAATTGACCAATTAATCCACAGTGAAATGTACCAAATACAAATAAATAATGCTCAACTTAGACACTCACATCTTGCCGTCCCCAAAACCATTATTACGTAATAAAGTGGCACATTCAACGACCTGTCAGATTTGGCAGATTGTCTTCAATATAAGCTGTTTTTAGACAAAGAGAAAATTGAGTTCTGAAACTTACAGGATGTTTTATAGTACAATGACCTCCTCTTATATGTCAAAAGATAAATCGAATTTTGATTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2232 True 526 lncRNA 0.38 2 2979190 2979861

Neighbor

gene id symbol gene type direction distance location
CI01000000_02895656_02896151 NA coding downstream 82611 2895055 ~ 2896579 (-)
CI01000000_02738104_02750391 NA coding downstream 228637 2737658 ~ 2750553 (-)
CI01000000_02662396_02664142 NA coding downstream 314006 2662381 ~ 2665184 (-)
CI01000000_02595861_02603891 NA coding downstream 375299 2595861 ~ 2603891 (-)
CI01000000_02554934_02555230 NA coding downstream 423960 2554579 ~ 2555230 (-)
CI01000000_03062516_03066890 NA coding upstream 82621 3062482 ~ 3066920 (-)
CI01000000_03118493_03127143 PDLIM7 coding upstream 137847 3117708 ~ 3127222 (-)
CI01000000_03129624_03148993 PDLIM7 coding upstream 149603 3129464 ~ 3148993 (-)
CI01000000_03172562_03175863 HIGD2A coding upstream 192248 3170391 ~ 3175863 (-)
CI01000000_03195338_03205585 RNF44 coding upstream 215136 3194997 ~ 3205720 (-)
G1928 NA non-coding downstream 97108 2881760 ~ 2882082 (-)
G1919 NA non-coding downstream 113227 2865727 ~ 2865963 (-)
G1891 NA non-coding downstream 150571 2828361 ~ 2828619 (-)
G1870 NA non-coding downstream 216622 2762290 ~ 2762568 (-)
G1869 NA non-coding downstream 217796 2761188 ~ 2761394 (-)
G2069 NA non-coding upstream 202987 3182848 ~ 3183118 (-)
G2070 NA non-coding upstream 203837 3183698 ~ 3183965 (-)
G2075 NA non-coding upstream 261425 3241286 ~ 3241617 (-)
G2076 NA non-coding upstream 261810 3241671 ~ 3241939 (-)
G2078 NA non-coding upstream 288886 3268747 ~ 3269009 (-)
G1270 NA other downstream 1000854 1924081 ~ 1978336 (-)
CI01000000_01357072_01359013 NA other downstream 1619252 1355476 ~ 1359013 (-)
G1077 NA other downstream 1628012 1332179 ~ 1351178 (-)
CI01000000_00683745_00689383 NA other downstream 2289737 682205 ~ 689610 (-)
G795 NA other downstream 2821200 157542 ~ 157990 (-)
CI01000000_03245643_03246684 NA other upstream 265273 3245134 ~ 3246721 (-)
CI01000000_03564077_03564373 NA other upstream 586838 3562887 ~ 3567571 (-)
G2484 NA other upstream 590205 3570066 ~ 3573554 (-)
CI01000000_04079738_04081018 MIF other upstream 1098260 4078121 ~ 4081117 (-)

Expression


Co-expression Network