Gene
RNA
| Item | Value |
|---|---|
| gene id | G2078 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000000 |
| NCBI id | null |
| chromosome length | 19091038 |
| location | 3268747 ~ 3269009 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2331 | True | 263 | lncRNA | 0.35 | 1 | 3268747 | 3269009 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000000_03267149_03267334 | NA | coding | downstream | 1263 | 3266498 ~ 3267484 (-) |
| CI01000000_03260989_03265875 | SNCB | coding | downstream | 2605 | 3260989 ~ 3266142 (-) |
| CI01000000_03245643_03246684 | NA | coding | downstream | 22026 | 3245134 ~ 3246721 (-) |
| CI01000000_03235219_03236826 | NA | coding | downstream | 31158 | 3234448 ~ 3237589 (-) |
| CI01000000_03195338_03205585 | RNF44 | coding | downstream | 63027 | 3194997 ~ 3205720 (-) |
| CI01000000_03564077_03564373 | NA | coding | upstream | 293878 | 3562887 ~ 3567571 (-) |
| CI01000000_03584834_03629968 | CTNNA1 | coding | upstream | 315255 | 3584264 ~ 3630022 (-) |
| CI01000000_03646840_03648095 | NA | coding | upstream | 377341 | 3646350 ~ 3649004 (-) |
| CI01000000_03663588_03683915 | CTNNA1 | coding | upstream | 394442 | 3663451 ~ 3684382 (-) |
| CI01000000_03767897_03770852 | TSPAN17.S, TSN17, TSPAN5A, TSPAN17 | coding | upstream | 498888 | 3767897 ~ 3770852 (-) |
| G2076 | NA | non-coding | downstream | 26808 | 3241671 ~ 3241939 (-) |
| G2075 | NA | non-coding | downstream | 27130 | 3241286 ~ 3241617 (-) |
| G2070 | NA | non-coding | downstream | 84782 | 3183698 ~ 3183965 (-) |
| G2069 | NA | non-coding | downstream | 85629 | 3182848 ~ 3183118 (-) |
| G1993 | NA | non-coding | downstream | 288886 | 2979190 ~ 2979861 (-) |
| G2079 | NA | non-coding | upstream | 1184 | 3270193 ~ 3270418 (-) |
| G2085 | NA | non-coding | upstream | 5597 | 3274606 ~ 3274835 (-) |
| G2110 | NA | non-coding | upstream | 38475 | 3307484 ~ 3307695 (-) |
| G2131 | NA | non-coding | upstream | 67290 | 3336299 ~ 3337047 (-) |
| G2168 | NA | non-coding | upstream | 128287 | 3397296 ~ 3397512 (-) |
| CI01000000_03172562_03175863 | HIGD2A | other | downstream | 92906 | 3170391 ~ 3175863 (-) |
| G1270 | NA | other | downstream | 1290411 | 1924081 ~ 1978336 (-) |
| CI01000000_01357072_01359013 | NA | other | downstream | 1908809 | 1355476 ~ 1359013 (-) |
| G1077 | NA | other | downstream | 1917569 | 1332179 ~ 1351178 (-) |
| G2484 | NA | other | upstream | 301057 | 3570066 ~ 3573554 (-) |
| CI01000000_04079738_04081018 | MIF | other | upstream | 809112 | 4078121 ~ 4081117 (-) |
| G2730 | NA | other | upstream | 1117374 | 4386383 ~ 4390152 (-) |
| CI01000000_05465020_05466303 | NA | other | upstream | 2195049 | 5464058 ~ 5466516 (-) |
