CI01000000_03235219_03236826


Basic Information

Item Value
gene id CI01000000_03235219_03236826
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 3234448 ~ 3237589 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_03235219_03236826.mRNA
ACTGCCAGGTTGAGTCTGGTTTCCAGGGAAACTAAAAATCAGAAGCTTTCAGTACTCGCAGCCAAAGTGAAATCCAAGGACTACCATCCACTGAGATTCTTCTGGAAAACAAACCATCTACAGCCTGCCTCTTATTTTGAGCATCTAAAAGAGGAGCTTGGAGTGTGAAGACATGCTTTGGCTTTGAAAATATGGATACAGCTTTTGATCTGTTGTGCAGTTGAGGTATGTGTCGTTGGGGTGTTCTTTTTCAATAACGGTCTCATTGTGTCGTCGTAGTTTGGGTTTTAGAGGGTATTGTTACCGAGCAAGTTCTCTGTGTGTGGATGAACCGAATCAGACAGCGACCATGACATTATTAGATCTCTCTTTTTTAGAATGAAAAAAATAGGAATCGACTTATTAGCAACTGATACTAGTCTTCCTTTCATATGTATTGTAAGGCTGAAGTTTGTATGTAATTTTATGTAAAAAATAATTTCAAGAACAGAAATGATGATTTTTGTCAGTATCTGAGATCATTAAAAAAACAATCTGACTTGAATTGATTTTTATCTATTGTAATATGTTTTCAAAAATTACAAAAATGAGTATGCTGTCATTAATGCATGTCAAGTGCCATTTTTTGATAATTGCACCCGCATTAATGCACTAATGCATTTATGTAAATGTTTTCCAGCAAAACTATCAGTGGTGTGAGACCGTGAAGCTCAGACATTTTACTTTCCCTCTCTCGGATCAACACAAACCCATCTTTAAACCCATGGAGGGTCCTGTTCTGACAGAAAGTGAAGTTTGGAAAGTTGGCTCAGGGACCAGCACAACTTTAAACACGGATGACACAAGTATTGACTATACGCCTCTTATGAAGGACACTGTTACTGATGAAAACCTGTCAAAGGCATCTGAAAACCCAGGGACCTCAATACAAGAGGAGATCTGCGGCAGCATCCAGGAGCAACCTGACCCAGAGGTTACATCAGATCAGATCAAGTCAGTAATTCCACATGAGCAGCGATTAGAAGAGGTTTTATCTTCCACTCAAACAGCAGTTGAGAGCAATGAGCCACCTGAGGCAGAGTGCAAACAAGAGAGGTGTGTTAACCAAGCAGAGGAACCAGCAGATAAGACGTGCTTGGCACCTGGCCGACAGAACCTTGACCAGGAGATTAACCAGGAGATCACCATACTGGTGACCAATCATGACTGTACATTGGAGGATGAGGAGGATGAAGAGTTTGGGGAGCAGAAAACTTCCAGCTGCCCTACTGAACCCGATACTGTCTCTTCCATTGAGGGTGGAGGAGCGACTAAGGAAGAGAGTCTCGATGGTTCCATCGTTGTGGTGAACATGATTGAGGTCAGTCAAGTTCAGAAGACCAGCGTGATAAGCAATGTATCAACTGAGCAGAATACCGCCACTAAAGAACCAAGATTGCCTGGAGATCCTGGGGATAGTAGCAGTGAGACAAACTCTGGAAGAAAATGTTCAAGCACCCCTCAGAAAACAGACGCAAGTAGCACACATGCTAACACAAGGGCCTCGGTGGAAGTGAATGTCTACAGTCTGAAAGATCAGCCCACACAGCCTGAAGATGTAGAAGTAAAACTGAAGAAAACCGAATCGACTGAATCCAGGGATGCCATTCGGCCCTCGCAAGAGACGCTCGGCTTGAATCGGTCACCTGGACGCACACAGCATGTGCAAACCCAGGTCAGTCTGGAAGTGATGTACCAATCAGTGGCCACCAGCCCCATGACTCCTCCCGAAGGCTCCGCAGCATTCCTTTTTCCAACCACCTTTGGAAAACTCGCCAACAAGTGTAGTACAGAGGTGGCCGAGACCATACAGACCAAAGATGCTGAGTTGCAGGTGGGCTTGCAGGTGGAATTACGTTCGGTTGCCACAGCTCCCATGAGCCCAATCATTCTGACAGCACCTGAGGTTATCCCAGAGCCGGAACCACGTATTGGGGTGGTGCCAGAGGAAGTTCCAGAACCAGTTCAGGAGGTGAGCTGGGACGAAAAGGGAATGACTTGGGAGGTGTACGGTGCAGTGGTGGAGGTGGCAGTGCTGGGTACGGCCATCCAGAAACACCTGGAGAAACAGGTAAAGAAGCAAAAGAAACAACCTTCAGCTTTGCCTGCTCTGACAGATGTTCTGCCAGCGGATCTGACCGAAACATCTACAACGATGCCTTCCAGTCCTCCCCCCATGTCAGACCCTGGTGAAAGCAGCCCAGCCAAAGAACAAAGCGAAGAAAAGATAGTGCAGAGCGGCAGGCGTCGACAGAATCATTTTCGCCAGTGGTTCAGAAACGTCCGACGACCAAGTTGTTGTTCAAGACCACGTCAAGATGAGGAAAACTAAGAAAGGCATGACAGTTGAAACCACTTTAATAGTCCAAATGAGACAATCTCTCCCAGATTTGTGCACTTTGGCTGTGCACAGGATTGGGTTTTGTTTGATGATACGCCCCTTTAACATTCTTAAGACATTTGAAATGACTCGTACTGACACCTTGCCATAAGAAGCCCCTATATGGATAATCATCGTTTTTGGTTTGGTTTGATAAACTGCAAACAATTACAGTCGTCTTGATTTCTCTTTGCATTTTGGCTTTGAAATTGCTCCTTCCAGCTTTGTTGCTATGAGTGTATATTTGCTTGCTTCTGTCAAGACCGTGCTACCCTGATGTTGTTGTGGTCAGTGAGGATCACTTTTAAAGTGCCCTTTTACAATATTTTACACAAATAATTTTACCTTTAAAATTTATATATTTCAAACATGTATATGAATTCACCATGTATAGTTAAGGAGTGGTAGAATACATTTATAGAGTGACAGTACCAAGTACTGCGTATTAGACAAAAATGAACCTAGAAATTCTTGGTGTTTCAGGCAACATGTAATAGATGACGTCTCTGATTTTCCAACAGTGAAATGTTTGGTGTTCTTTATGGGTTTCAGATTCTTCTTTTTCTATTGGCTTTTGTATAACCCTGTAATATGAAATGGATTTGTCTTGTTTTTGCAGTTCAGCTCAGCACACCCGTAACGAACACACCTTCAAGCCTTACATTTTGTGTGATGTTTTGTGACTGTTGTGAGAGCTGTAAAGTGAATAGTTTTGAAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_03235219_03236826.mRNA True 3142 mRNA 0.43 1 3234448 3237589

Neighbor

gene id symbol gene type direction distance location
CI01000000_03195338_03205585 RNF44 coding downstream 28728 3194997 ~ 3205720 (-)
CI01000000_03172562_03175863 HIGD2A coding downstream 58585 3170391 ~ 3175863 (-)
CI01000000_03129624_03148993 PDLIM7 coding downstream 85455 3129464 ~ 3148993 (-)
CI01000000_03118493_03127143 PDLIM7 coding downstream 107226 3117708 ~ 3127222 (-)
CI01000000_03062516_03066890 NA coding downstream 167528 3062482 ~ 3066920 (-)
CI01000000_03245643_03246684 NA coding upstream 7786 3245134 ~ 3246721 (-)
CI01000000_03260989_03265875 SNCB coding upstream 23400 3260989 ~ 3266142 (-)
CI01000000_03267149_03267334 NA coding upstream 28909 3266498 ~ 3267484 (-)
CI01000000_03564077_03564373 NA coding upstream 325298 3562887 ~ 3567571 (-)
CI01000000_03584834_03629968 CTNNA1 coding upstream 346675 3584264 ~ 3630022 (-)
G2070 NA non-coding downstream 50483 3183698 ~ 3183965 (-)
G2069 NA non-coding downstream 51330 3182848 ~ 3183118 (-)
G1993 NA non-coding downstream 254587 2979190 ~ 2979861 (-)
G1928 NA non-coding downstream 352366 2881760 ~ 2882082 (-)
G1919 NA non-coding downstream 368485 2865727 ~ 2865963 (-)
G2075 NA non-coding upstream 3697 3241286 ~ 3241617 (-)
G2076 NA non-coding upstream 4082 3241671 ~ 3241939 (-)
G2078 NA non-coding upstream 31158 3268747 ~ 3269009 (-)
G2079 NA non-coding upstream 32604 3270193 ~ 3270418 (-)
G2085 NA non-coding upstream 37017 3274606 ~ 3274835 (-)
G1270 NA other downstream 1256112 1924081 ~ 1978336 (-)
CI01000000_01357072_01359013 NA other downstream 1874510 1355476 ~ 1359013 (-)
G1077 NA other downstream 1883270 1332179 ~ 1351178 (-)
CI01000000_00683745_00689383 NA other downstream 2544995 682205 ~ 689610 (-)
G2484 NA other upstream 332477 3570066 ~ 3573554 (-)
CI01000000_04079738_04081018 MIF other upstream 840532 4078121 ~ 4081117 (-)
G2730 NA other upstream 1148794 4386383 ~ 4390152 (-)

Expression


Co-expression Network