aldoca (aldoca,LOC107727913,LOC107661107,LOC107714247,LOC107582599)


Basic Information

Item Value
gene id aldoca
gene name aldoca,LOC107727913,LOC107661107,LOC107714247,LOC107582599
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9801891 ~ 9805862 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258279.1
AAGCTCCGCCCTACAAGTGTCAGCATCCTCTGGGATATCACCTTCATAAAGAACTGGGACACTGGCACTGTTAAAGAATCAGTCACGTCTCATCTCGTCTGTAGGAAAAAGCCCCTTCAGTCTGAGTCAGTCGGTCCGCTCTGACCTGGTTGTGTTGGACATTTAGGATGACCCATCAGTTTCCTCCCCTCACCACTGAGCAGAAGAAGGAGCTCCATGAGATAGCTCTGCGCATAGTGACTCCAGGGAAAGGCATCCTAGCTGCAGACGAGTCCATAGGTAGCATGGGGAAGCGTTTGAACCAGATAGGAGTGGAGAACAACGAGGAGAACCGCCGGCTCTACCGCCAGGTGCTCTTCACCGCTGACGACCGCATCGATAACTGCATCGGTGGAGTGATCTTCTTCCACGAAACACTCTACCAGAACTCTGATGATGGCGTCCCATTCGTCAAGATGATAAAGGACAAGGGCATCACCATCGGAATCAAGGTTGACAAAGGCGTAGTCCCTTTGCCAGGGACTAATGGAGAAACCACTACACaagGTCTGGATGGGCTCTCAGAACGCTGCGCTCAGTATAAAAAGGATGGAGCTGACTTTGCGAAGTGGCGTTGTGTGATGAAAATCAGCGATACCACCCCGTCAAACCTGTGCATTAAAGAAAATGCTAAAGTCCTGGCTCGCTATGCTAGTATTTGTCAGCAGCATGGTATAGTACCCATAGTGGAACCCGAGATCCTACCTGATGGAGACCACGATTTGAAGCGTTGCCAGTTCGTTACAGAGAGGGTGCTTGCAGAAGTCTACAAAGCCATGTTTGATCATCATGTGTATCTGGAAGGCACGCTGCTCAAGCCCAACATGGTGACCCCTGGACACGGCTGCCCGACCAAATACAGCGCAGACGAGGTTGCAATGGCGACGGTCACTGCTCTGCGGCGTACTGTCCCGCCCGCAGTGACAGGTGTGACCTTTCTCTCAGGAGGTCAAAGCGAGGAGGAGGCCTCCATAAACCTAAATGCCATCAATAACTGTCCACTCGTGAAACCCTGGGCTCTCACCTTCTCATTCGGCCGAGCTCTGCAGGCCTCGGCTCTGAAGACCTGGCgcggacagagagagaatgaaaccGCCGCAACCGAGGAATTCATCAAACGAGCAGAGATCAACAGTCTGGCCTCTCAAGGGAAGTACACTGTGTGTGGTGACAGCAGCGGAGCCACTGGTCTTTCTCATTACCTTTCCAGCTATGCATATTGAAATGCAGCCGATTCACGTTATCCATTAGCTGAAAGCTAGCAGATTTCACTGCCACCTccacataaaacataattatttactCCTAAATGTGATGTTGATATACAGTAACACAGCACACGAAAGTGATTGCTAAGTTCGTTTTTGAGGATGTGGAATTTTGTGGTTCTGTCGTCTTAGAAACATTGTAAAATTATAGATTTAAGATAATTGGGAAAGTAATGGAGTATGAATGAAGTTACAATTGACTGTGTTATGTTGATCCTTCTTACTTACTGTCAACATTAAGAGTTTCTTAGGATAGATATAAGGATCTATATGCTTCTGTGATCTACCCTTTCATCATCTAAagctttaataaagcatttgttCTGATGAATATTGACAGCATGGCTAACAAGTTTATGAGTATTTGATTATTATGAATGTTCGGCTTGAATTACTGACAACCTGAatacaaactgaaaatgctGCAATAAAATTGTAAAGACAGAA

Function

symbol description
aldoca Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be active in cytosol. Is expressed in brain. Human ortholog(s) of this gene implicated in autoimmune disease of the nervous system. Orthologous to human ALDOC (aldolase, fructose-bisphosphate C).

NR:

description
PREDICTED: fructose-bisphosphate aldolase C-like

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0004332 fructose-bisphosphate aldolase activity molecular_function

KEGG:

id description
K01623 ALDO; fructose-bisphosphate aldolase, class I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258279.1 True 1754 mRNA 0.47 9 9801891 9805862

Neighbor

gene id symbol gene type direction distance location
srsf1a srsf1b,srsf1a,LOC107704814,LOC107587230,LOC103029385,LOC108278759,LOC108415197,LOC107661749 coding downstream 338 9798018 ~ 9801553 (-)
hnf1ba hnf1b,hnf1ba,LOC107582604,LOC107672416,LOC107554285,LOC107661110 coding downstream 24206 9765226 ~ 9777685 (-)
synrg synrg,LOC107713459,LOC107554286,LOC107582605,LOC107727910 coding downstream 41721 9716699 ~ 9760170 (-)
rab34a rab34a,LOC107758713,LOC107672399,LOC107657101 coding downstream 229157 9568660 ~ 9572734 (-)
proca1 proca1,LOC107758694,LOC107582608,LOC107672398,LOC107694032,LOC107752378,LOC107592754 coding downstream 236129 9560292 ~ 9565762 (-)
rskra sgk494a,LOC107672358,LOC107714397 coding upstream 1799 9807661 ~ 9816653 (-)
LOC122358935 LOC107672385,LOC107661106,LOC107727920 coding upstream 11260 9817122 ~ 9839615 (-)
glod4 glod4,LOC107582600,LOC107716459,LOC107727906,LOC107672377,LOC107661120 coding upstream 34655 9840517 ~ 9843470 (-)
nxn nxn,typx,LOC107672411,LOC107661105,LOC106612785 coding upstream 42222 9848084 ~ 9906627 (-)
txndc17 txndc17,LOC107661118,LOC107727907 coding upstream 101699 9907561 ~ 9909153 (-)
LOC122359357 NA non-coding downstream 10716 9780732 ~ 9791175 (-)
G105279 NA non-coding downstream 51402 9749836 ~ 9750489 (-)
G105278 NA non-coding downstream 63248 9719933 ~ 9738643 (-)
G105277 NA non-coding downstream 85581 9716009 ~ 9716310 (-)
G105273 NA non-coding downstream 95927 9705675 ~ 9705964 (-)
G105321 NA non-coding upstream 280970 10086832 ~ 10093990 (-)
G105329 NA non-coding upstream 306923 10112785 ~ 10113020 (-)
G105339 NA non-coding upstream 367616 10173478 ~ 10175599 (-)
G105361 NA non-coding upstream 438086 10243948 ~ 10249609 (-)
G105362 NA non-coding upstream 439602 10245464 ~ 10251995 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 4968 9763871 ~ 9796923 (-)
G105059 NA other downstream 246104 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 365094 9434426 ~ 9436797 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 755776 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 1139027 8657688 ~ 8662864 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 706769 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 853072 10658934 ~ 10663588 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 1267419 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 1496368 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 1520650 11326512 ~ 11342116 (-)

Expression


Co-expression Network