nxn (nxn,typx,LOC107672411,LOC107661105,LOC106612785)


Basic Information

Item Value
gene id nxn
gene name nxn,typx,LOC107672411,LOC107661105,LOC106612785
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9848084 ~ 9906627 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259175.1
TAACAGGAGCGCATTCCTCAACACCGCGCACAGCGGAGGCACACGACGGCCGCCGTCTCTCGAACCGCGGGACTGCCGAACCGGGCACCAGGGCCTGCGGATCTCCACCGAGCGCTCAGGCTTCACCTCCAAACCGCCCGAGTAAGCCGAGCAAAGCGAGCGCGGTGCGCTTAGAGGGCTCAGCAGCGATGTCGGAGTTTCTGGTGAATCTGCTCGGAGAGCGGCTCGTCAACGGAGAGAAAGCCGAGGTGGACGTTCACTCGCTGGGCAGCAAGCTGTCTCTGCTCGGGCTCTACTTCGGCTGCAGTTTGAACGGTCCCTGCAAGCAGTTCAACGCGAGTCTGTGCGAGTTTTACAGCAAGTTTAAAAAATCCTCGGAGCACAAGGACAAATTGGAAATCGTCTTCATCTCTTCGGATCAGGACCAGAAACAGTGGCAGGACTTCTTGCAGGAGATGCAATGGCCGGCGTTGCCTTTTAAAGACAGACACAAAAAGaTGAAGCTTTGGAACAAGTACAAGGTGACTAGTATTCCTTCTTTGGTGTTCATCGATGCTGCCACGGGGAAGGTGGTGTGTCGGAACGGCTTGCTCGTGGTCAGAGATGATCCAAAAGGCCTGGAGTTCCCCTGGGGGCCGAAGCCCTTTGCGGAGGTGGTGGCCGGGCCCTTGCTCAGGAACAACCGACAGACGACAGACAGCAGTGCCCTGGAGGGATCCTATGTGGGGGTTTACTTCTCTGCACACTGGTGTCCTCCTTGTCGCAGTCTAACCCGAGTGTTGGTGGAATCGTACCGGAAAGTGAAAGAATCAGGGCACAAATTTGAGATTGTGTTTGTCAGTGCTGATAGGTCAGAGGAGTCATTTACGCAGTATTTTAGCGAGATGCCGTGGTTGGCGGTGCCGTACACAGACGAGGCCAGGCGCTCACGACTCAACAGACTCTATGGAATCCAAGGTATCCCCACACTGATTTTACTGGACACAGAGGGTCACATGATCACGCGACAGGGGCGGGTGGAGATTCTCAATGACCCCGACTGTAGACTTTTCCCATGGCACCCTCGTCCCGTGCTGGAGCTCAGCGAATCCAACGCCGTGCAGCTGCACGAAGGGCCCTGCCTGGTTCTGTTCGTAGATGCTGAGGAAGAGGGCGAGCTGGAGCCGGCCAAGgagctcatccagccgatcgcAGAGAAGATCATGGCCAAATACAAGGCAAAGGAGGAGGAGACACCACTGCTCTTTTTTGTCGCTGGAGAGGATGATATGAGCGATTCCCTGCGGGACTACACCAACCTTCCTGAAGCCGCGCCGCTCCTCACCATCCTGGACATGTCAGCCCGCGCCAAATACGTCAAAGACGTGGAGGAAATCACACCAGCCGTGGTAGAACAGTTTGTTAGTGACTTTCTGGCCGAGAAGCTCAAACCGGAGCCCATTTGAAGTCCTCGAACCTCCCCGCACCCTTTTACCCGAACCTCCATCTGACCCTTGACCTCCAGgcgtgctctctctctctctctccccctctctctctcctctccctgTCAGACTGTTTCAACAGAAGCGTACTTTGTATTGACATTTTACTTCTTTTAATACGTACCCCTCCATCTCGAAGCGGCCGCCTCCTCCTGTGGTGCCTTGCATTTACTACAGCGCTGATGgtaaaatgcagatttttttacgTTGATTGTCTTTTGCCGTTACATTTAGAGATCAGATCGACCCCCCCCCCCGCAGCTGCAAGTGAACACAATTCGCTTTTATTGAGATTTTTATCAAGCGTTTCCTTCTATCCTTGGATATTGTTTCAAGAATCGAGAGCTTAGAATAAATATAGCTTGGtagatgtattattatttgtatttttccacAGACACTGCACATTTCACGTGGCCATATGTCCTGTACGGCTGTGATTCTCTACTTTATGGGTGCTGATGAACATGCATACACGAACAAGCCGATGTTGATATCCTTGTATAGAAGGCGCTGTCTGTTCTTTGTGTAGCTGccgctgtttatttttaatgcagttgtCTGTAGTCGATACTTTAAAGGTCTTCGCCCACCTTCTTGTTGATATTTGATGTTGTCGAATGACTGATCCGTTCCCATCTCAAACATGACATTTAAGTGGATTTTCTGTGAAGGTCCCCTGTATTAAAGCGGTCTATGTTTTTTTTCGAAGGCacaataaacagcatttaattgcAAGCTTCCTTATGAAATGTAGCCAATTAAAGCACAGTTTGTCTGTCCTTGGTTGTGTTTGAAATGTCATAGCCATTAAAACTCACTGTTTAAAA

Function

symbol description
nxn Predicted to enable protein-disulfide reductase (NAD(P)) activity. Predicted to be involved in circulatory system development; negative regulation of Wnt signaling pathway; and negative regulation of protein ubiquitination. Predicted to act upstream of or within Wnt signaling pathway and cell differentiation. Predicted to be located in cytosol and nucleus. Is expressed in several structures, including basal plate midbrain region; brain; immature eye; lens; and neural plate. Human ortholog(s) of this gene implicated in Robinow syndrome. Orthologous to human NXN (nucleoredoxin).

NR:

description
PREDICTED: nucleoredoxin

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0030178 negative regulation of Wnt signaling pathway biological_process
GO:0031397 negative regulation of protein ubiquitination biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005829 cytosol cellular_component
GO:0005634 nucleus cellular_component
GO:0047134 protein-disulfide reductase activity molecular_function

KEGG:

id description
K17609 NXN; nucleoredoxin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259175.1 True 2314 mRNA 0.51 8 9848084 9906627

Neighbor

gene id symbol gene type direction distance location
glod4 glod4,LOC107582600,LOC107716459,LOC107727906,LOC107672377,LOC107661120 coding downstream 4614 9840517 ~ 9843470 (-)
LOC122358935 LOC107672385,LOC107661106,LOC107727920 coding downstream 8469 9817122 ~ 9839615 (-)
rskra sgk494a,LOC107672358,LOC107714397 coding downstream 31431 9807661 ~ 9816653 (-)
aldoca aldoca,LOC107727913,LOC107661107,LOC107714247,LOC107582599 coding downstream 42222 9801891 ~ 9805862 (-)
srsf1a srsf1b,srsf1a,LOC107704814,LOC107587230,LOC103029385,LOC108278759,LOC108415197,LOC107661749 coding downstream 46531 9798018 ~ 9801553 (-)
txndc17 txndc17,LOC107661118,LOC107727907 coding upstream 934 9907561 ~ 9909153 (-)
fam222bb fam222bb,LOC107714568,LOC107727927,LOC107661104,LOC107554279,LOC107582597 coding upstream 12877 9919504 ~ 9926294 (-)
caln1 caln1,LOC107582596,LOC107659935,LOC107672359,LOC107554278,LOC103034584,LOC108443712 coding upstream 61224 9967851 ~ 10024285 (-)
tyw1 tyw1,LOC107672403,LOC107727925,LOC107582638,LOC107554250,LOC108443711 coding upstream 127525 10034152 ~ 10081728 (-)
tmem120ab zgc:103681,LOC107582661,LOC107672420,LOC107716217 coding upstream 175282 10081909 ~ 10085668 (-)
LOC122359357 NA non-coding downstream 56909 9780732 ~ 9791175 (-)
G105279 NA non-coding downstream 97595 9749836 ~ 9750489 (-)
G105278 NA non-coding downstream 109441 9719933 ~ 9738643 (-)
G105277 NA non-coding downstream 131774 9716009 ~ 9716310 (-)
G105273 NA non-coding downstream 142120 9705675 ~ 9705964 (-)
G105321 NA non-coding upstream 180205 10086832 ~ 10093990 (-)
G105329 NA non-coding upstream 206158 10112785 ~ 10113020 (-)
G105339 NA non-coding upstream 266851 10173478 ~ 10175599 (-)
G105361 NA non-coding upstream 337321 10243948 ~ 10249609 (-)
G105362 NA non-coding upstream 338837 10245464 ~ 10251995 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 51161 9763871 ~ 9796923 (-)
G105059 NA other downstream 292297 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 411287 9434426 ~ 9436797 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 801969 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 1185220 8657688 ~ 8662864 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 606004 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 752307 10658934 ~ 10663588 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 1166654 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 1395603 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 1419885 11326512 ~ 11342116 (-)

Expression


Co-expression Network