LOC122358636


Basic Information

Item Value
gene id LOC122358636
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 12822323 ~ 12827039 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258514.1
TGTCAGCCATGTTTGCCGGGTCACTACTGCAGTAATGAGACCACCAGCGAGGAGGCCATGCTCAGAGTAATGGTCTGCCCGCCAGGTTTCCTCTGCTCACAGGGCCTGGATCGAGAACCCCAGCGCTCAGCGGTATTCTGCCCAATAGGCTTTTACTGTCCCGGTGGAAGCGTTGATCCTAATCCTGTTCCGTGCCCCAAAGGAACCTACAGTCATCAGCCAGGACTACGTGACCCTTCAGACTGCACAAAGTGTCCAGAGGGCAAATACTGCTACACAGAGAATCCCCAGCAAGAGCCCATTATTGAACCAACAGGAAACTGTCCTGATGGATACTACTGTCCTCCTGGTACGGGACACCCAAACTCATTTCCGTGCCAGTCTGGCTTCTTCAGGAATGACTCGTATGGACATGGAGGAGAAGCTTGTGTGGAATGTCCTCCTGGTCACTACTGTCCTGCTCTGGCCACAAACACTCCTACAGTCTGTCCACAgGGTTTCTACTGTAATGAGGGGAGCTCAGCCCCAGAGCCGTGTGAAGAGGGCACATTTGGATCCCGGCCAGCCCTGAGTGAAGCATCACAGTGCACCCTATGTAGTGGGGGGAAATATTGCACCGGTTTGGGCAAAACTGAACCCACTGGGGACTGTGAAGGAGGATTCTATTGTAGACAGGGGTCTACAAGTCCTGTTCCTCCTGATAATCATGGTCATGAAGGGGGTGTGTGTCCCGCTGGCAGTTTCTGCCCGCCAGGCTCAGTTCACCCACAGCCCTGCCCTTCAGGAACCTACAGTAACAGCACAGGCCTCCAACATGCAGAGCAGTGTGTCACCTGTCCTCCAGGTTATTACTGTTTAGGAACAAACGCTACATCTCCTTCTGGTTCATGCTTTGCTGGCTATTACTGCACCGGAGGTTCAGCCACACCAGTCCAAAATGAAGCTGAGGAGGGACACTACTCTTCAGAAGGAGCTGTGAGGGCCGAACCGTGCGCACTGGGAACTTTCCAACCAGGAAGAGGCTACAACTCATGCATTGAATGCCAATCAGGAAGACTGTGCAACAAGACAGGCCTATCACAGCAGCCCCTGTGTCCACCTGGACACTTCTGCCCTGCTGGATCCCTGATTGCTCACCCGTGTCCCCCTGGTACATACACGGCAGGTTCAGGAGCGGAGGATCTGCAGCACTGCGGCCCGTGTGATGCTGGTCACTACTGTCACTCACCTGGACTGACTGCTCCTCAGGGACCCTGTGAGCCTGGTTTTTACTGCACTGGTGGATCTCACGTTGCCTCTCCGattAGCTCCAGATATGGTGACATATGCCCCATCGGTTATTACTGTCCAGCAGGCACCAGGTACCCTCATGAGTACCCCTGTCCTCCTGGAACCTGGAGTAACGCACTGGGGGCCCAGAATGTGTCGTCCTGTTGGCTCTGCCCTGCTGGATTCTTCTGCAACAGCTCTGGCCTCACTCAGCCCACTGGAATATGTGCTCCAGGGTTTTATTGTGCTGGTGGAGCTAAAACGGCCATGCCTGATGATGGGTTAACAGGAAACAGGTGTCCGACGCGGTATTACTGTCCACAGGGGTGTACATCCCCTCTGCACTGCCCTGATGGAACACACTCAAATAGCACAGGTGCTGCAGAGTGCAGTGACTGTCCCACTGGATGGCTGTGTCTGGAGGGGGAGGAGCTCCAGTTGTGTCCAGAGGGACATTACTGCCTGGGGGGCACAGTGGAGGACATCCTCCCCTGCCCTCCAGGCACATACAGCCCCAAAGCAGGACAAAACCAAGTAGAGCAGTGTTTACTGTGCTCAGCTGGTGAGAGCAGTGCCCCTGCTTTACTTACACCTTTGGCAGTTTTAATAGCATTGGTGTAGTTTTATGTTCATCATACCCACCTATCATTTTAAGGAATGTTCTGTGAGGATTGGGGACTAGTTGAACCTACTGGTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258514.1 True 1968 mRNA 0.54 11 12822323 12827039

Neighbor

gene id symbol gene type direction distance location
si:ch211-286b4.4 LOC107586279,LOC107670948,LOC107709101,LOC107657226,LOC107709100,LOC107717261,LOC107601684 coding downstream 3252 12788653 ~ 12819071 (-)
scn3b scn3b,LOC107670963,LOC107709134,LOC107586232,LOC107717288,LOC107731150 coding downstream 39538 12773305 ~ 12782785 (-)
drd2a drd2a,LOC107586233,LOC107670954,LOC107717269,LOC107709110 coding downstream 65413 12744913 ~ 12756910 (-)
zgc:162608 zgc:162608,LOC107709131,LOC107586234,LOC107670966,LOC107717287,LOC107657244,LOC107601703 coding downstream 144490 12675658 ~ 12677833 (-)
laynb layn,laynb,LOC107709129,LOC107601717,LOC107657256,LOC107586284 coding downstream 155338 12662489 ~ 12666985 (-)
LOC122358637 NA coding upstream 577 12827616 ~ 12831884 (-)
ccdc153 ccdc153,LOC107718291 coding upstream 394803 13221842 ~ 13226120 (-)
mcamb mcam,LOC107718268 coding upstream 427269 13254308 ~ 13282231 (-)
c1qtnf5 c1qtnf5,LOC107601727,LOC107690457,LOC107718301 coding upstream 467727 13294766 ~ 13298810 (-)
kmt2a LOC107743706,LOC107683818,LOC107585544 coding upstream 473443 13300482 ~ 13331024 (-)
G106184 NA non-coding downstream 81249 12738051 ~ 12741074 (-)
G106137 LOC107657248,LOC107601702,LOC107709130,LOC107586283 non-coding downstream 149875 12672187 ~ 12672448 (-)
G106099 NA non-coding downstream 223750 12598286 ~ 12598573 (-)
G106092 NA non-coding downstream 305999 12515676 ~ 12516324 (-)
G106081 NA non-coding downstream 375277 12431911 ~ 12447046 (-)
G106211 LOC107709112 non-coding upstream 11725 12838764 ~ 12840397 (-)
G106442 NA non-coding upstream 118048 12945087 ~ 12945373 (-)
G106525 NA non-coding upstream 779145 13606184 ~ 13606897 (-)
G106541 NA non-coding upstream 840532 13667571 ~ 13669379 (-)
G106548 NA non-coding upstream 926283 13753322 ~ 13756160 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other downstream 532271 12280291 ~ 12290052 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other downstream 788729 12030648 ~ 12033594 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other downstream 966428 11842766 ~ 11855895 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 1464770 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 1480207 11326512 ~ 11342116 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 627443 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 917516 13744555 ~ 13751057 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other upstream 1051546 13878585 ~ 13881694 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other upstream 1056881 13883920 ~ 13905494 (-)
cluha cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 other upstream 1081767 13908806 ~ 13925727 (-)

Expression


Co-expression Network