LOC122359476


Basic Information

Item Value
gene id LOC122359476
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 14462507 ~ 14490693 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252705.1
AGCAAAGAGATGTTATCAGATACGGAACTATCGCGATCGCAAAACGAGctattttaaaagtctttaagcTAGCGTTATGTGTTAACGCGCTGTGGACGCGTTAAAGCTCCGCGTTTGTTTACAAGCACAGCTCTGACCCCAGCAGGCCCGCGTTGGCCCTAGGTTCTCGTCAGCACGAGGCACGATCAGGCCCTGCAAGTTACGGTGGAAACGCGACTGGCCCTGGCACGCGCTAGTCCGCGCGCTTTGCGTTCTGGGAGACCGTGTCCCACGCAGTGTCTTCAGATGTATACTTCAAATTTAAACCAACATAGCAGCTGAGATTGATCTCGTGAGATCAAGCTGCTGTCGTCAGGATCTCGGGGGCAATTGCTGTGAGTAGCAGAAATGCCATCTACAGGACATCGTTCAACACCTCATCCTCACACTAAGAGTGGtgatgtgcattatttttctgcTTTCAACACTGtgagtGATCAGAACTGAACTGTCAAATCATACAACTGTTGATTTTGGAACTGCCTCTGGACTACAGCGAGGAAGAGAAACACTTGTCTACGAGAGCTTCCGTCTGTCACAGATTCTTCAAAACTCATTAGCGTAAGAGTCCTCAATTCAGTGCACATGTGCGTCGCCCTCAGCGTGAACCTGTTTTTGTGTGGTATGTCCTCCAGCCTGTGATTAATTGGCGGTTCATTATTGAGACTGTTTATTTGGTCCTGGGGACACGGGGGACCGAGGATTCAGTGACTCGGTACGGTTGCAACAAGGTGATTAAGCAGATGTTATTGGAGGATTATGATGTTCTCCAGTGTCATTTCTGGATAACAATACTCAATGCAAATTGAAACGCGTATTATAggctaatataaatatataaatgtcctGAGGAAAAATAGGGACCTgatgaaacatttataaaaataatatagtaatttaGACTAAGAGATAATAACCAATATTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252705.1 True 967 lncRNA 0.45 4 14462507 14490693

Neighbor

gene id symbol gene type direction distance location
LOC122359057 dph1,LOC107664954,LOC107685060,LOC107585615 coding downstream 210465 14177540 ~ 14252042 (-)
taok1a taok1a,LOC107585593,LOC107664926,LOC107743657,LOC107744793,LOC107592626,LOC107685056,LOC108425880 coding downstream 421358 14021498 ~ 14041149 (-)
tp53i13 LOC107664927,LOC107585595,LOC107743658 coding downstream 441748 14014962 ~ 14020759 (-)
mmp20b mmp20b,LOC107743745,LOC107585621,LOC107664917 coding downstream 449440 14009424 ~ 14013067 (-)
hif1al LOC107744792,LOC107664924,LOC107743660,LOC107585591 coding downstream 467193 13982867 ~ 13995314 (-)
rpa1 rpa1,LOC107562955,LOC107548543,LOC107743720,LOC107685155 coding upstream 3276 14493969 ~ 14515049 (-)
serpinf2b serpinf2b,LOC107743653,LOC107664923,LOC107548563,LOC107562956,LOC107744799,LOC107685062 coding upstream 25005 14515698 ~ 14520262 (-)
wdr81 wdr81,LOC107743652,LOC107664921,LOC107685063,LOC107744800,LOC107562947 coding upstream 29827 14520520 ~ 14532746 (-)
slc47a4 si:dkey-175a17.4,LOC107743742,LOC107664908,LOC107548554,LOC107685178,LOC107562953,LOC107744808 coding upstream 62826 14553519 ~ 14560857 (-)
LOC122358978 LOC107664896,LOC107743719,LOC107548544,LOC100537389 coding upstream 70664 14561357 ~ 14570122 (-)
G106641 NA non-coding downstream 302244 14115824 ~ 14160263 (-)
LOC122359546 NA non-coding downstream 302248 14147489 ~ 14160259 (-)
LOC122358515 NA non-coding downstream 341568 14097779 ~ 14120939 (-)
G106638 NA non-coding downstream 368274 14086749 ~ 14094233 (-)
G106637 NA non-coding downstream 378509 14081810 ~ 14083998 (-)
G106705 NA non-coding upstream 46885 14537578 ~ 14547466 (-)
G106707 NA non-coding upstream 57137 14547830 ~ 14548903 (-)
G106710 NA non-coding upstream 62090 14552783 ~ 14553300 (-)
LOC122358902 tbx2b,LOC107757046,LOC107589697,LOC107685069 non-coding upstream 394493 14885186 ~ 14893461 (-)
G106809 NA non-coding upstream 435026 14925719 ~ 14926001 (-)
LOC122359058 dph1,LOC107585615,LOC107664954,LOC107685060 other downstream 140068 14298251 ~ 14322439 (-)
mmp20a NA other downstream 453221 14003741 ~ 14009286 (-)
cluha cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 other downstream 536780 13908806 ~ 13925727 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other downstream 557013 13883920 ~ 13905494 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other downstream 580813 13878585 ~ 13881694 (-)
G107064 eml2,LOC107669753,LOC107548590,LOC107743713,LOC107685092 other upstream 1285815 15776508 ~ 15782011 (-)
xaf1 LOC107714184,LOC107578343 other upstream 1416669 15907362 ~ 15910474 (-)
ly6d si:ch211-207n23.2,LOC107587620,LOC107683433,LOC107666183 other upstream 1464316 15955009 ~ 16063740 (-)
LOC122359003 LOC107714165,LOC107588126 other upstream 1921943 16412636 ~ 16426414 (-)
msi2b msi2b,msi2,LOC108425902,LOC107682662,LOC108435815,LOC108277875,LOC107587484,LOC105028669,LOC106603292 other upstream 2060498 16551191 ~ 16762064 (-)

Expression


Co-expression Network