serpinf2b (serpinf2b,LOC107743653,LOC107664923,LOC107548563,LOC107562956,LOC107744799,LOC107685062)


Basic Information

Item Value
gene id serpinf2b
gene name serpinf2b,LOC107743653,LOC107664923,LOC107548563,LOC107562956,LOC107744799,LOC107685062
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 14515698 ~ 14520262 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259646.1
GCTATATGAGGTAAAGATCAATGAAAGTTGAAATGTAACTGCCTGCTCTGAGACTGCCAACCCCTACAGCAAAGAATTTTCCCATTGCctattttgtgtgtttctttccCGAATCAGGGCTGGATCCGCTGGAGATTTGCACGACTAACTTCTAGAACATGAACTTGTGTTTTCTGGCATTCCTCCTCCTCTGTTACGCCAAGCAAGGCTGGACGGAAGATGCGATTGAACCAGAGGATGGAGCGGAGCCTTTAATTCCTCTCATCCCACTGATTCCTAGTAAACCCATATCAGATTTGAAGGGCACTCTTGACCCCAGAATCATAACCATAGCAGAAGCACTCACAGTTTCACCAGATGGCCTAGAAGCAGATCCTTCAGCCTCTCCTGGGCAGAAAGAAGGCTCCTCTGAGGAGGACCTTGATTCTGTCTGTGATGGGGACATGACCAGCCAACAGATTAAGCGGACCGCAGGCAACGGCATTCTGAAGCTTGGCCTTTGGTTCTTGGAAAACTTGAAGCCTAGTCCAGAGCAGCCCAATGTCATCATTTCCCCTCTTAGCTTGTCAGTAGCACTCTCGCAGCTCGCACTGGGAGCAACAAATGAGACAGAAGAGCTGCTTTTACAGCACCTGCACGCGGATGCACTGCCATGCTACCACACTGCCCTCAGCAGCCTCCTGCGCGACTTCCGCAAAAGGAGCCTGTCTGTCGCCAGCCGCATCTATCTGCAAACTGGATTTCAAGCAAAACAGAACTTTATGGAAAATTCTCAGAAACTGTATGACTCCGAGCCGGCCACACTGACTGATGTTAAGGACATTAACGAATGGGTTAAGAAAGTCACAAATGGGCACATCTCAGAGTTTTTGTCCAGTCTGCCTCTCAGCACTGTTATGATGCTCATCAACGCCATGCATTACAAAGGAGAGTGGCTTACTCGTTTTGACCCTCACTTCACCTCCACTGAGCTCTTCTACATAGATGAAAACCAGATTGTTAATGTGGATATGATGCTTGGGCCAAAGTATCCTCTCAGCGTTTTCACCCACCATGAGCTGGATGCCCAGATTGCTCGATTCCCCTTTAAAGGTGACAAGAGTCTACTAGTAATAATGCCAACATCTGGACAGGTGAATGTATCAGCTATTGCGGCTAAGCTCAATATCTCAGATCTTTACCATCGATTACCACGAGAAAGAAACATGCAGGTCAAGCTCCCAAAATTCAAACTTGACTTCAAACAGGACCTTCAAGAAGCCATGACAAACATGGGTCTAGGACTACTGTTTAGTCGTCCAAAGCTGGACCGCATCTCTGAGGACTCCTTGTTTGTGTCCAGTGTACAGCATATGTCCAGTATTGAAATAAACGAAGAAGGGGCAGAGGCAGTGGCAGCAACAAGCGTGATCATCTCACGTTCTAACCCTTCATTTACTGTCAACCAGCCATTTTTCTTTGCCCTAATCGATGACTTAAGTCAAACGCCATTCTTCTTGGGGGTAATTTCCAACCCAAACCCTGGAGCATCCACTATGGTCACAAACCCTGGCAATTCAGATAAAGATAATGACAAACCACACTCTTTCGATATTCCTCCAAAGTAGATTGTTTTCATACATTTAGCAGAACGAGTGCGTAAGTTGTTTGTTGACTGCGTAGTTGGTCCCCACTAGGAGGCAAATTAAGGACATATTAATTCTAGCAGATAATTTGAAATGGCTTTCCCCATGTAAATTAATGTTGTTCTAAATATCTCAATCTTTGTTTAGAAagtcatgatttatttttatttttttggtttgtttgttttataattaaagaaatttgACCAGAAA
>XM_043259647.1
GGCACTGGATTGTTTGTCTGGCATATAAGAAAGCAATATAAAAGCCCTCTATTCAATAACGGTCTATATTAATCTCAGCATTGGCAGCGCTGACTTGTCATCTCCTTCTCATTTATGTGCAGTTTTTCTTGTGCAGCGTGTTTACTCATATTCAGTATCTCACATGCACTGTCAGCAGTGAGTTTATTTAGCTCGGCAAACTATACAGTACCAGTTTATAACCTACTTCATTCAAAGTCTTCAAAGATCCACGAATCTACACACTTGAGTTTGATGTTTGACCCCAAGGTCTCTCAATATTTACATCTATGAAGAGGGCTGGATCCGCTGGAGATTTGCACGACTAACTTCTAGAACATGAACTTGTGTTTTCTGGCATTCCTCCTCCTCTGTTACGCCAAGCAAGGCTGGACGGAAGATGCGATTGAACCAGAGGATGGAGCGGAGCCTTTAATTCCTCTCATCCCACTGATTCCTAGTAAACCCATATCAGATTTGAAGGGCACTCTTGACCCCAGAATCATAACCATAGCAGAAGCACTCACAGTTTCACCAGATGGCCTAGAAGCAGATCCTTCAGCCTCTCCTGGGCAGAAAGAAGGCTCCTCTGAGGAGGACCTTGATTCTGTCTGTGATGGGGACATGACCAGCCAACAGATTAAGCGGACCGCAGGCAACGGCATTCTGAAGCTTGGCCTTTGGTTCTTGGAAAACTTGAAGCCTAGTCCAGAGCAGCCCAATGTCATCATTTCCCCTCTTAGCTTGTCAGTAGCACTCTCGCAGCTCGCACTGGGAGCAACAAATGAGACAGAAGAGCTGCTTTTACAGCACCTGCACGCGGATGCACTGCCATGCTACCACACTGCCCTCAGCAGCCTCCTGCGCGACTTCCGCAAAAGGAGCCTGTCTGTCGCCAGCCGCATCTATCTGCAAACTGGATTTCAAGCAAAACAGAACTTTATGGAAAATTCTCAGAAACTGTATGACTCCGAGCCGGCCACACTGACTGATGTTAAGGACATTAACGAATGGGTTAAGAAAGTCACAAATGGGCACATCTCAGAGTTTTTGTCCAGTCTGCCTCTCAGCACTGTTATGATGCTCATCAACGCCATGCATTACAAAGGAGAGTGGCTTACTCGTTTTGACCCTCACTTCACCTCCACTGAGCTCTTCTACATAGATGAAAACCAGATTGTTAATGTGGATATGATGCTTGGGCCAAAGTATCCTCTCAGCGTTTTCACCCACCATGAGCTGGATGCCCAGATTGCTCGATTCCCCTTTAAAGGTGACAAGAGTCTACTAGTAATAATGCCAACATCTGGACAGGTGAATGTATCAGCTATTGCGGCTAAGCTCAATATCTCAGATCTTTACCATCGATTACCACGAGAAAGAAACATGCAGGTCAAGCTCCCAAAATTCAAACTTGACTTCAAACAGGACCTTCAAGAAGCCATGACAAACATGGGTCTAGGACTACTGTTTAGTCGTCCAAAGCTGGACCGCATCTCTGAGGACTCCTTGTTTGTGTCCAGTGTACAGCATATGTCCAGTATTGAAATAAACGAAGAAGGGGCAGAGGCAGTGGCAGCAACAAGCGTGATCATCTCACGTTCTAACCCTTCATTTACTGTCAACCAGCCATTTTTCTTTGCCCTAATCGATGACTTAAGTCAAACGCCATTCTTCTTGGGGGTAATTTCCAACCCAAACCCTGGAGCATCCACTATGGTCACAAACCCTGGCAATTCAGATAAAGATAATGACAAACCACACTCTTTCGATATTCCTCCAAAGTAGATTGTTTTCATACATTTAGCAGAACGAGTGCGTAAGTTGTTTGTTGACTGCGTAGTTGGTCCCCACTAGGAGGCAAATTAAGGACATATTAATTCTAGCAGATAATTTGAAATGGCTTTCCCCATGTAAATTAATGTTGTTCTAAATATCTCAATCTTTGTTTAGAAagtcatgatttatttttatttttttggtttgtttgttttataattaaagaaatttgACCAGAAA

Function

symbol description
serpinf2b Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in COVID-19 and alpha-2-plasmin inhibitor deficiency. Orthologous to human SERPINF2 (serpin family F member 2).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
K03983 SERPINF2, AAP; alpha-2-antiplasmin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259646.1 False 1838 mRNA 0.45 9 14515698 14519934
XM_043259647.1 True 2037 mRNA 0.44 10 14515698 14520262

Neighbor

gene id symbol gene type direction distance location
rpa1 rpa1,LOC107562955,LOC107548543,LOC107743720,LOC107685155 coding downstream 649 14493969 ~ 14515049 (-)
LOC122359057 dph1,LOC107664954,LOC107685060,LOC107585615 coding downstream 263656 14177540 ~ 14252042 (-)
taok1a taok1a,LOC107585593,LOC107664926,LOC107743657,LOC107744793,LOC107592626,LOC107685056,LOC108425880 coding downstream 474549 14021498 ~ 14041149 (-)
tp53i13 LOC107664927,LOC107585595,LOC107743658 coding downstream 494939 14014962 ~ 14020759 (-)
mmp20b mmp20b,LOC107743745,LOC107585621,LOC107664917 coding downstream 502631 14009424 ~ 14013067 (-)
wdr81 wdr81,LOC107743652,LOC107664921,LOC107685063,LOC107744800,LOC107562947 coding upstream 258 14520520 ~ 14532746 (-)
slc47a4 si:dkey-175a17.4,LOC107743742,LOC107664908,LOC107548554,LOC107685178,LOC107562953,LOC107744808 coding upstream 33257 14553519 ~ 14560857 (-)
LOC122358978 LOC107664896,LOC107743719,LOC107548544,LOC100537389 coding upstream 41095 14561357 ~ 14570122 (-)
pitpnm3 pitpnm3,LOC107664939,LOC107685064,LOC108425893,LOC108277935 coding upstream 57625 14577887 ~ 14644990 (-)
kiaa0753 kiaa0753,LOC107685065,LOC107548565,LOC107723875 coding upstream 126384 14646646 ~ 14664812 (-)
LOC122359476 NA non-coding downstream 25005 14462507 ~ 14490693 (-)
G106641 NA non-coding downstream 355435 14115824 ~ 14160263 (-)
LOC122359546 NA non-coding downstream 355439 14147489 ~ 14160259 (-)
LOC122358515 NA non-coding downstream 394759 14097779 ~ 14120939 (-)
G106638 NA non-coding downstream 421465 14086749 ~ 14094233 (-)
G106705 NA non-coding upstream 17316 14537578 ~ 14547466 (-)
G106707 NA non-coding upstream 27568 14547830 ~ 14548903 (-)
G106710 NA non-coding upstream 32521 14552783 ~ 14553300 (-)
LOC122358902 tbx2b,LOC107757046,LOC107589697,LOC107685069 non-coding upstream 364924 14885186 ~ 14893461 (-)
G106809 NA non-coding upstream 405457 14925719 ~ 14926001 (-)
LOC122359058 dph1,LOC107585615,LOC107664954,LOC107685060 other downstream 193259 14298251 ~ 14322439 (-)
mmp20a NA other downstream 506412 14003741 ~ 14009286 (-)
cluha cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 other downstream 589971 13908806 ~ 13925727 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other downstream 610204 13883920 ~ 13905494 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other downstream 634004 13878585 ~ 13881694 (-)
G107064 eml2,LOC107669753,LOC107548590,LOC107743713,LOC107685092 other upstream 1256246 15776508 ~ 15782011 (-)
xaf1 LOC107714184,LOC107578343 other upstream 1387100 15907362 ~ 15910474 (-)
ly6d si:ch211-207n23.2,LOC107587620,LOC107683433,LOC107666183 other upstream 1434747 15955009 ~ 16063740 (-)
LOC122359003 LOC107714165,LOC107588126 other upstream 1892374 16412636 ~ 16426414 (-)
msi2b msi2b,msi2,LOC108425902,LOC107682662,LOC108435815,LOC108277875,LOC107587484,LOC105028669,LOC106603292 other upstream 2030929 16551191 ~ 16762064 (-)

Expression


Co-expression Network