RNA id: XM_043259646.1


Basic Information

Item Value
RNA id XM_043259646.1
length 1838
RNA type mRNA
GC content 0.45
exon number 9
gene id serpinf2b
representative False

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 14515698 ~ 14520262 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTATATGAGGTAAAGATCAATGAAAGTTGAAATGTAACTGCCTGCTCTGAGACTGCCAACCCCTACAGCAAAGAATTTTCCCATTGCctattttgtgtgtttctttccCGAATCAGGGCTGGATCCGCTGGAGATTTGCACGACTAACTTCTAGAACATGAACTTGTGTTTTCTGGCATTCCTCCTCCTCTGTTACGCCAAGCAAGGCTGGACGGAAGATGCGATTGAACCAGAGGATGGAGCGGAGCCTTTAATTCCTCTCATCCCACTGATTCCTAGTAAACCCATATCAGATTTGAAGGGCACTCTTGACCCCAGAATCATAACCATAGCAGAAGCACTCACAGTTTCACCAGATGGCCTAGAAGCAGATCCTTCAGCCTCTCCTGGGCAGAAAGAAGGCTCCTCTGAGGAGGACCTTGATTCTGTCTGTGATGGGGACATGACCAGCCAACAGATTAAGCGGACCGCAGGCAACGGCATTCTGAAGCTTGGCCTTTGGTTCTTGGAAAACTTGAAGCCTAGTCCAGAGCAGCCCAATGTCATCATTTCCCCTCTTAGCTTGTCAGTAGCACTCTCGCAGCTCGCACTGGGAGCAACAAATGAGACAGAAGAGCTGCTTTTACAGCACCTGCACGCGGATGCACTGCCATGCTACCACACTGCCCTCAGCAGCCTCCTGCGCGACTTCCGCAAAAGGAGCCTGTCTGTCGCCAGCCGCATCTATCTGCAAACTGGATTTCAAGCAAAACAGAACTTTATGGAAAATTCTCAGAAACTGTATGACTCCGAGCCGGCCACACTGACTGATGTTAAGGACATTAACGAATGGGTTAAGAAAGTCACAAATGGGCACATCTCAGAGTTTTTGTCCAGTCTGCCTCTCAGCACTGTTATGATGCTCATCAACGCCATGCATTACAAAGGAGAGTGGCTTACTCGTTTTGACCCTCACTTCACCTCCACTGAGCTCTTCTACATAGATGAAAACCAGATTGTTAATGTGGATATGATGCTTGGGCCAAAGTATCCTCTCAGCGTTTTCACCCACCATGAGCTGGATGCCCAGATTGCTCGATTCCCCTTTAAAGGTGACAAGAGTCTACTAGTAATAATGCCAACATCTGGACAGGTGAATGTATCAGCTATTGCGGCTAAGCTCAATATCTCAGATCTTTACCATCGATTACCACGAGAAAGAAACATGCAGGTCAAGCTCCCAAAATTCAAACTTGACTTCAAACAGGACCTTCAAGAAGCCATGACAAACATGGGTCTAGGACTACTGTTTAGTCGTCCAAAGCTGGACCGCATCTCTGAGGACTCCTTGTTTGTGTCCAGTGTACAGCATATGTCCAGTATTGAAATAAACGAAGAAGGGGCAGAGGCAGTGGCAGCAACAAGCGTGATCATCTCACGTTCTAACCCTTCATTTACTGTCAACCAGCCATTTTTCTTTGCCCTAATCGATGACTTAAGTCAAACGCCATTCTTCTTGGGGGTAATTTCCAACCCAAACCCTGGAGCATCCACTATGGTCACAAACCCTGGCAATTCAGATAAAGATAATGACAAACCACACTCTTTCGATATTCCTCCAAAGTAGATTGTTTTCATACATTTAGCAGAACGAGTGCGTAAGTTGTTTGTTGACTGCGTAGTTGGTCCCCACTAGGAGGCAAATTAAGGACATATTAATTCTAGCAGATAATTTGAAATGGCTTTCCCCATGTAAATTAATGTTGTTCTAAATATCTCAATCTTTGTTTAGAAagtcatgatttatttttatttttttggtttgtttgttttataattaaagaaatttgACCAGAAA

Function

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252705.1 lncRNA downstream 25005 14462507 ~ 14490693 (-) True LOC122359476
TU157558 lncRNA downstream 355435 14115824 ~ 14160263 (-) True G106641
XR_006252717.1 lncRNA downstream 355439 14147489 ~ 14160259 (-) True LOC122359546
TU157561 lncRNA downstream 365588 14147973 ~ 14150110 (-) False LOC122359546
XR_006252614.1 lncRNA downstream 394759 14097779 ~ 14120939 (-) True LOC122358515
TU157641 lncRNA upstream 17644 14537578 ~ 14547466 (-) True G106705
TU157643 lncRNA upstream 27896 14547830 ~ 14548903 (-) True G106707
TU157650 lncRNA upstream 32849 14552783 ~ 14553300 (-) True G106710
XR_006252657.1 lncRNA upstream 365252 14885186 ~ 14892343 (-) False LOC122358902
TU157765 lncRNA upstream 365258 14885192 ~ 14893461 (-) True LOC122358902
XM_043259644.1 mRNA downstream 649 14493969 ~ 14515049 (-) True rpa1
XM_043259178.1 mRNA downstream 193259 14298251 ~ 14322439 (-) True LOC122359058
XM_043259177.1 mRNA downstream 263656 14177540 ~ 14252042 (-) True LOC122359057
XM_043258393.1 mRNA downstream 474555 14021498 ~ 14041143 (-) True taok1a
XM_043259643.1 mRNA upstream 586 14520520 ~ 14532746 (-) False wdr81
XM_043259642.1 mRNA upstream 586 14520520 ~ 14532746 (-) True wdr81
XM_043258997.1 mRNA upstream 33585 14553519 ~ 14560124 (-) False slc47a4
XM_043258996.1 mRNA upstream 33586 14553520 ~ 14560857 (-) True slc47a4
XM_043258999.1 mRNA upstream 41423 14561357 ~ 14570122 (-) True LOC122358978
TU157568 other downstream 193301 14298344 ~ 14322397 (-) False LOC122359058
TU157450 other downstream 589991 13920069 ~ 13925707 (-) False cluha
TU157458 other downstream 610204 13883920 ~ 13905494 (-) True G106571
TU157457 other downstream 634004 13878585 ~ 13881694 (-) True G106570
TU157426 other downstream 766489 13747036 ~ 13749209 (-) False LOC122359192
TU158145 other upstream 1256574 15776508 ~ 15782011 (-) True G107064
XR_006252641.1 other upstream 1387428 15907362 ~ 15910474 (-) False xaf1
XR_006252671.1 other upstream 1895173 16415107 ~ 16426389 (-) False LOC122359003
XR_006252653.1 other upstream 2031348 16551282 ~ 16762063 (-) False msi2b
XR_006252673.1 other upstream 2267661 16787595 ~ 16834736 (-) False nf1a

Expression Profile